Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 107 2e-18
seq3205 84.2 2e-11
>seq6412
Length=17604
Score = 107 bits (118), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064
|||||| ||| |||||| || || |||||||||| | ||||| | || || || ||
Sbjct 16967 ATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCCAGTTG 17026
Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124
||| ||||| ||||| | ||||| ||||| | || | || |||||||||| ||| | |
Sbjct 17027 CTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC-TGAATCT 17085
Query 42125 TTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183
| | || | ||| || |||||||||||| || || || | |||||||| || ||||
Sbjct 17086 TAGCTTTAACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCG 17145
Query 42184 TTA 42186
|||
Sbjct 17146 TTA 17148
>seq3205
Length=38634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| ||||||||||| || ||| ||||| |||| || || ||||| || ||||| |
Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 42137
| | ||||| || |||| ||| | | |||||| ||| ||| | || | || | |
Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCC-TGAATCTTCGACTTCACATTG 37502
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||||||| || || || | || ||||| || ||||| || ||||| ||
Sbjct 37503 TCGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 37562
Query 42198 AAG 42200
|||
Sbjct 37563 AAG 37565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543153929312800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |