Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6412 96.9 3e-15 seq4403 93.3 4e-14 >seq6412 Length=17604 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | |||||||||||||| || || ||||| | | || | | || Sbjct 16502 AAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATC 16561 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || ||||| || || | || | ||| ||||||||||| || || || || || || Sbjct 16562 TTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATC 16621 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||| ||| || | || || | || ||||||| || | || Sbjct 16622 TTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGT 16681 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | || || |||||||||||||| Sbjct 16682 CTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714 >seq4403 Length=14617 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| | | || || || | || || || || |||||||| ||||||| Sbjct 4950 ACCACCGCGCAAGCGCAAAACCAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCTGA 5009 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || | || || |||||||||||||| |||| |||||||| ||||| ||||| Sbjct 5010 GAGTGTCCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATTAGCCGCTGTTGGTCTGGAGG 5069 Query 64336 AATTCCTTCTTTTTCT 64351 ||||| || || ||| Sbjct 5070 GATTCCCTCCTTATCT 5085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499590650994800