Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 96.9 3e-15
seq4403 93.3 4e-14
>seq6412
Length=17604
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | |||||||||||||| || || ||||| | | || | | ||
Sbjct 16502 AAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATC 16561
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || ||||| || || | || | ||| ||||||||||| || || || || || ||
Sbjct 16562 TTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATC 16621
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| |||||| ||| ||| || | || || | || ||||||| || | ||
Sbjct 16622 TTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGT 16681
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || || ||||||||||||||
Sbjct 16682 CTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
>seq4403
Length=14617
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| |||||||| | | || || || | || || || || |||||||| |||||||
Sbjct 4950 ACCACCGCGCAAGCGCAAAACCAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCTGA 5009
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || | || || |||||||||||||| |||| |||||||| ||||| |||||
Sbjct 5010 GAGTGTCCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATTAGCCGCTGTTGGTCTGGAGG 5069
Query 64336 AATTCCTTCTTTTTCT 64351
||||| || || |||
Sbjct 5070 GATTCCCTCCTTATCT 5085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499590650994800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |