Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 111 2e-19
seq3205 86.0 6e-12
>seq5240
Length=8030
Score = 111 bits (122), Expect = 2e-19
Identities = 342/524 (65%), Gaps = 19/524 (4%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383
|| || ||| | || || |||||| | ||||| || | |||||| || |||| |
Sbjct 4447 GTTCCCTGCATCCGTAAGAAGGCTGATTGGGCCATTCATTGGATCCAG---GACAAGGAG 4391
Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
| || | ||| | || ||||||||||||| |||||||| | ||||| || ||
Sbjct 4390 TCGACTTTTGCCCAACGACTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGT 4331
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||||| ||||||| | | || | | ||| | |||||||| |||| |||
Sbjct 4330 TCATTTGCTTCCATCTTCTGGTTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCA 4271
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC---TACTAC 52559
|| ||| |||| ||||| ||||| || |||||||| |||||||| |||||| | || |
Sbjct 4270 AATGAGCTGATTTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTCTTGTTCTCC 4211
Query 52560 AA--GACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGG 52617
| | | | || | || ||| || | |||| || ||| || |
Sbjct 4210 CATCTAAACCACCGCCCCAGCAA--GGA---GGTC---ATCCAAGATATTATCACTGACG 4159
Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677
| || || || || | ||||| || || | || || || || ||||| || ||||
Sbjct 4158 CTGTTGCAATTGAGCAAGAGTTCTTAACCGAGGCCCTTCCAGTTTCTCTGCTCGGAATGA 4099
Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737
|| || || ||||| | ||||||||||| || || ||| | || | || || |
Sbjct 4098 ACTCGAAGCTGATGTGTCAATACATCGAGTTCGTTGCTGATAGGCTCCTCGTTGCCCTTG 4039
Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797
| | ||| ||| ||| | |||||| ||||| || ||| | | || || | |
Sbjct 4038 GAAACAAGAAGCACTACAATGTGACCAATCCCTTTGATTTCATGGAAAGTATATCTTTGG 3979
Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841
|| || |||||||| ||||||||||| |||||||| ||| ||
Sbjct 3978 CTGGTAAAACCAACTTCTTCGAGAAGCGTGTCGGCGACTATCAG 3935
>seq3205
Length=38634
Score = 86.0 bits (94), Expect = 6e-12
Identities = 131/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| ||||| ||||||||| ||| || || |||||||||||| || |||| | |
Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTG 138542
||| ||||||||| || || || || || || || || ||| | || | || ||||
Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATC-CTGAATCTTCGACTTCACATTG 37502
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | |||||| ||||||| ||||| | || | || ||||| ||||| || || ||
Sbjct 37503 -TCGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 37561
Query 138603 AAA 138605
||
Sbjct 37562 GAA 37564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496208617562400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |