Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5240 127 3e-24 >seq5240 Length=8030 Score = 127 bits (140), Expect = 3e-24 Identities = 328/497 (66%), Gaps = 7/497 (1%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||| || || ||| ||||| ||||||||| | || || || Sbjct 3953 CTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTTTCCATGAAATCAAAGGGATT 4012 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 |||| | ||| ||||| ||| || || | || | ||| || || || || || Sbjct 4013 GGTCACATTGTAGTGCTTCTTGTTTCCAAGGGCAACGAGGAGCCTATCAGCAACGAACTC 4072 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||||| ||| |||| || || ||||| ||| || || || || | Sbjct 4073 GATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGAGAAACTGGAAGGGCCTCGGT 4132 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTACC 159887 | ||||| | |||||| | || || || || | ||| | || || | | | | Sbjct 4133 TAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATATCTTGGATGACCTCCTTGCT 4192 Query 159888 CCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 ||| || | ||| | |||| |||||| ||||||||| |||||| ||| Sbjct 4193 GGGGCGGTGGTTTAGATGGGAG-----AACAAGAGGCAGGCAAAGTCGGTGTGCAGGCCC 4247 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || || || | ||| || || | | | || ||||| | || ||| || Sbjct 4248 TCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCATCAAGCCGCGCTTCTTC 4307 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 | ||| || |||| ||||| | ||| |||||||| ||||| ||||| || || ||| Sbjct 4308 AACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTCGACGGCAGCGAAGGCC 4367 Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126 || || | | |||||| | | |||| ||| |||| ||||||| |||||| Sbjct 4368 ACCAGTCGTTGGGCAAAAGTCGACTCCTTGTCCTGGATCCAATGAATGGCCCAATCAGCC 4427 Query 160127 TTCTTTGCGATGCACGG 160143 ||||| |||||| || Sbjct 4428 TTCTTACGGATGCAGGG 4444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795069025055200