Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 127 3e-24
>seq5240
Length=8030
Score = 127 bits (140), Expect = 3e-24
Identities = 328/497 (66%), Gaps = 7/497 (1%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||| || || ||| ||||| ||||||||| | || || ||
Sbjct 3953 CTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTTTCCATGAAATCAAAGGGATT 4012
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
|||| | ||| ||||| ||| || || | || | ||| || || || || ||
Sbjct 4013 GGTCACATTGTAGTGCTTCTTGTTTCCAAGGGCAACGAGGAGCCTATCAGCAACGAACTC 4072
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||||| ||| |||| || || ||||| ||| || || || || |
Sbjct 4073 GATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGAGAAACTGGAAGGGCCTCGGT 4132
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTACC 159887
| ||||| | |||||| | || || || || | ||| | || || | | | |
Sbjct 4133 TAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATATCTTGGATGACCTCCTTGCT 4192
Query 159888 CCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946
||| || | ||| | |||| |||||| ||||||||| |||||| |||
Sbjct 4193 GGGGCGGTGGTTTAGATGGGAG-----AACAAGAGGCAGGCAAAGTCGGTGTGCAGGCCC 4247
Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006
||||| || || || | ||| || || | | | || ||||| | || ||| ||
Sbjct 4248 TCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCATCAAGCCGCGCTTCTTC 4307
Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066
| ||| || |||| ||||| | ||| |||||||| ||||| ||||| || || |||
Sbjct 4308 AACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTCGACGGCAGCGAAGGCC 4367
Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126
|| || | | |||||| | | |||| ||| |||| ||||||| ||||||
Sbjct 4368 ACCAGTCGTTGGGCAAAAGTCGACTCCTTGTCCTGGATCCAATGAATGGCCCAATCAGCC 4427
Query 160127 TTCTTTGCGATGCACGG 160143
||||| |||||| ||
Sbjct 4428 TTCTTACGGATGCAGGG 4444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795069025055200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |