Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 104 3e-17
seq3205 98.7 1e-15
>seq6412
Length=17604
Score = 104 bits (114), Expect = 3e-17
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| |||||||| || |||||| || || ||||| || |||| || || | || ||
Sbjct 16962 ACGAGATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCC 17021
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| |||||||| || |||||||| ||||| ||||| | || | || ||||||||||
Sbjct 17022 AGTTGCTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGA 17081
Query 46505 ATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||| | ||| || |||||||||||| || || || | |||||||| ||
Sbjct 17082 ATCTTAG-CTTTAACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTT 17140
Query 46564 GCCCGT 46569
|||||
Sbjct 17141 TCCCGT 17146
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| |||||||| || || ||||||||||| || || |||| || | | || ||
Sbjct 16506 ACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCTTCT 16565
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| || ||||| ||||| || |||||||||| || | | |||||| || |
Sbjct 16566 AGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCTTGG 16625
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|| || ||||| | | | |||||| ||| || || || | ||| || || ||
Sbjct 16626 ATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTCTTC 16685
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || ||||||||
Sbjct 16686 CCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
>seq3205
Length=38634
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| || |||||||||||| || || || |||| ||||| ||||| |||||||| |
Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
| || ||||| || |||| || | | |||||| ||| |||||| ||| | |
Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGT 37503
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||||||||| || || || | || ||||| || |||||||| || || || |
Sbjct 37504 CGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 37563
Query 46584 AG 46585
||
Sbjct 37564 AG 37565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565177142288400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |