Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 113 2e-19
seq3638 109 2e-18
seq3205 87.8 7e-12
>seq6412
Length=17604
Score = 113 bits (124), Expect = 2e-19
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || || ||||| || || ||||| || || || || || ||
Sbjct 16714 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTCGAGTCGTCA 16655
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | | || |||||| ||||||||||| || || || || || ||
Sbjct 16654 GACACGATCGATAATGTCAAGTCAAAAATCCAAGATAAGGAGGGTATCCCCCCCGACCAG 16595
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| || || ||| | ||||| ||||| |||||||| ||||| || | |||||||||
Sbjct 16594 CAACGGTTGATCTTCGCTGGGAAGCAACTAGAAGATGGCAGAACGTTATCTGATTATAAT 16535
Query 391230 AT 391231
||
Sbjct 16534 AT 16533
Score = 105 bits (116), Expect = 3e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| || || || ||||| || || ||||| || || ||||| |||||
Sbjct 16943 AATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATC 16884
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || || | | ||| ||| || || |||||||| || || || || || ||
Sbjct 16883 AGATACGATCGATAATGTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCA 16824
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||| || || || | ||||||||||| || || || | || || | ||||||||
Sbjct 16823 GCAACGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTATAA 16764
Query 391229 TAT 391231
|||
Sbjct 16763 TAT 16761
>seq3638
Length=54862
Score = 109 bits (120), Expect = 2e-18
Identities = 190/277 (69%), Gaps = 11/277 (4%)
Strand=Plus/Minus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
|||| ||||| ||||| ||||| ||| | ||||||||||| ||||| ||||| || || |
Sbjct 18503 TTACCGTTCCTGCTTACTTCAACGATTCTCAACGGCAAGCCACTAAGGATGCCGGCCAGA 18444
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| || | |||||||| || || | ||||| || ||||| ||||| |||| || |
Sbjct 18443 TTGCCGGCCTTAATGTTCTGCGCGTTGTCAATGAGCCCACAGCTGCTGCCTTAGCCTACG 18384
Query 451449 GACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507
| || | |||| |||| || | |||| || | || | |||||
Sbjct 18383 GTCTCG----------AGAAGGAGAATGATCGCATTATTGCTGTCTACGACCTCGGTGGC 18334
Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567
|| ||| |||| ||| | ||| ||| || | || || ||||| || || | |||
Sbjct 18333 GGTACTTTCGATATCTCTATTCTTGAAATCCAAAAGGGCGTTTTTGAGGTGAAATCCACC 18274
Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604
|| || || || ||||| || ||||| ||| | ||||
Sbjct 18273 AACGGCGACACCCATCTTGGTGGTGAGGATTTCGATA 18237
>seq3205
Length=38634
Score = 87.8 bits (96), Expect = 7e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118
||||| || || ||||| ||||| || ||||| ||||| || || || || | ||
Sbjct 37564 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTTGAGGTAGAGTCGAGCGACACAATC 37505
Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178
|| | | || || ||||| |||||||| || ||||| || |||||||| ||||||
Sbjct 37504 GACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGGATTCCACCCGATCAACAGCGTTTA 37445
Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238
|||||| | || || ||||| || || || | || || || || |||||| | |||
Sbjct 37444 ATTTTCGCCGGAAAGCAACTCGAGGACGGTCGGACACTGAACGACTACAATATTCAGAAG 37385
Query 391239 G 391239
|
Sbjct 37384 G 37384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975498928556360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |