Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2116 134 2e-26 seq3638 87.8 2e-12 >seq2116 Length=14111 Score = 134 bits (148), Expect = 2e-26 Identities = 234/338 (69%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||||||||| | || || || || ||||| || ||| ||||||| ||| Sbjct 1957 TCAAAATCTTCACCACCGAGATGAGTGTCACCGGCGGTAGCCAGGACCTCAAAGACACCA 1898 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | | || ||||| || ||||||||||| || ||| | | || | Sbjct 1897 TTGTCAATGGACAGGAGGGAGACATCGAAAGTACCACCACCGAGATCATACACGACGA-- 1840 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | | || || | |||| || | |||||| |||||||| || || || |||||| Sbjct 1839 TTTGGCGC-TCATCACCGGTCTTGTCCAAACCGTAAGCGATAGCTGCGGCGGTAGGTTCA 1781 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||| || | | || || |||||||| | ||||| || || || || | Sbjct 1780 TTGACGACACGGAGGACGGTAAGACCGGCAATAGTACCGGCATCCTTGGTAGCCTGCCTC 1721 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||| || ||||| || || || || ||||| |||| |||||| |||| || || Sbjct 1720 TGGGCATCATTGAAGTATGCGGGAACAGTGACGACAGCGTGGGTGACTGTCTTTCCAAGG 1661 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 || || ||||| || ||||| || ||||||||| Sbjct 1660 TAGCTCTCGGCGATCTCCTTCATCTTCCCAAGAACCAT 1623 >seq3638 Length=54862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/278 (68%), Gaps = 10/278 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||| | ||| || ||||| | || Sbjct 18238 ATCGAAATCCTCACCACCAAGATGGGTGTCGCCGTTGGTGGATTTCACCTCAAAAACGCC 18297 Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 || || || || || || | ||| || ||||| ||||| ||||| | | || | Sbjct 18298 CTTTTGGAT-TTCAAGAATAGAGATATCGAAAGTACCGCCACCGAGGTCGTAGAC-AGCA 18355 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | || || | ||| ||||||||||| || | || || || || || | Sbjct 18356 A-----TAATGCGATCATTCTCCTTCTCGAGACCGTAGGCTAAGGCAGCAGCTGTGGGCT 18410 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGT 7693 |||| | || || ||| || ||||| ||||| | ||| ||||| || || ||||| Sbjct 18411 CATTGACAACGCGCAGAACATTAAGGCCGGCAAT-CTGGCCGGCATCCTTAGTGGCTTGC 18469 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 ||||| |||||||| ||||| || || || || ||||| Sbjct 18470 CGTTGAGAATCGTTGAAGTAAGCAGGAACGGTAACGAC 18507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635063967482800