Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2116 134 2e-26
seq3638 87.8 2e-12
>seq2116
Length=14111
Score = 134 bits (148), Expect = 2e-26
Identities = 234/338 (69%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| |||||||||||||| | || || || || ||||| || ||| ||||||| |||
Sbjct 1957 TCAAAATCTTCACCACCGAGATGAGTGTCACCGGCGGTAGCCAGGACCTCAAAGACACCA 1898
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||||| | | || ||||| || ||||||||||| || ||| | | || |
Sbjct 1897 TTGTCAATGGACAGGAGGGAGACATCGAAAGTACCACCACCGAGATCATACACGACGA-- 1840
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| | | || || | |||| || | |||||| |||||||| || || || ||||||
Sbjct 1839 TTTGGCGC-TCATCACCGGTCTTGTCCAAACCGTAAGCGATAGCTGCGGCGGTAGGTTCA 1781
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | ||| || | | || || |||||||| | ||||| || || || || |
Sbjct 1780 TTGACGACACGGAGGACGGTAAGACCGGCAATAGTACCGGCATCCTTGGTAGCCTGCCTC 1721
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||| || ||||| || || || || ||||| |||| |||||| |||| || ||
Sbjct 1720 TGGGCATCATTGAAGTATGCGGGAACAGTGACGACAGCGTGGGTGACTGTCTTTCCAAGG 1661
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|| || ||||| || ||||| || |||||||||
Sbjct 1660 TAGCTCTCGGCGATCTCCTTCATCTTCCCAAGAACCAT 1623
>seq3638
Length=54862
Score = 87.8 bits (96), Expect = 2e-12
Identities = 190/278 (68%), Gaps = 10/278 (4%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | || || || || ||| | ||| || ||||| | ||
Sbjct 18238 ATCGAAATCCTCACCACCAAGATGGGTGTCGCCGTTGGTGGATTTCACCTCAAAAACGCC 18297
Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574
|| || || || || || | ||| || ||||| ||||| ||||| | | || |
Sbjct 18298 CTTTTGGAT-TTCAAGAATAGAGATATCGAAAGTACCGCCACCGAGGTCGTAGAC-AGCA 18355
Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| | || || | ||| ||||||||||| || | || || || || || |
Sbjct 18356 A-----TAATGCGATCATTCTCCTTCTCGAGACCGTAGGCTAAGGCAGCAGCTGTGGGCT 18410
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGT 7693
|||| | || || ||| || ||||| ||||| | ||| ||||| || || |||||
Sbjct 18411 CATTGACAACGCGCAGAACATTAAGGCCGGCAAT-CTGGCCGGCATCCTTAGTGGCTTGC 18469
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731
||||| |||||||| ||||| || || || || |||||
Sbjct 18470 CGTTGAGAATCGTTGAAGTAAGCAGGAACGGTAACGAC 18507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635063967482800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |