Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4403 96.9 8e-15
seq3205 86.0 1e-11
>seq4403
Length=14617
Score = 96.9 bits (106), Expect = 8e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|||||| ||||| ||||| ||||| || ||||| || ||||| | || || | |||||
Sbjct 4965 CAAAACCAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCTGAGAGTGTCCGGCCATC 5024
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| |||||||| || ||||| || || || |||||||||||||| || || || || ||
Sbjct 5025 CTCCAGCTGCTTGCCGGCGAAAATTAGCCGCTGTTGGTCTGGAGGGATTCCCTCCTTATC 5084
Query 195048 T 195048
|
Sbjct 5085 T 5085
>seq3205
Length=38634
Score = 86.0 bits (94), Expect = 1e-11
Identities = 129/182 (71%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| ||||||||||| ||| || || | || || ||||| ||||| || ||||| ||
Sbjct 37386 TTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAATT 37445
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| || ||||| || || ||||| || || || || ||||| || ||| || || ||
Sbjct 37446 AAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCG 37505
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|| ||||| ||| || || |||||||||| ||||| || |||| || || |||
Sbjct 37506 ATTGTGTCGCTCGA---CTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 37562
Query 195130 AA 195131
||
Sbjct 37563 AA 37564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109358353929890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |