Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4403 96.9 8e-15 seq3205 86.0 1e-11 >seq4403 Length=14617 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| ||||| ||||| ||||| || ||||| || ||||| | || || | ||||| Sbjct 4965 CAAAACCAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCTGAGAGTGTCCGGCCATC 5024 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || |||||||| || ||||| || || || |||||||||||||| || || || || || Sbjct 5025 CTCCAGCTGCTTGCCGGCGAAAATTAGCCGCTGTTGGTCTGGAGGGATTCCCTCCTTATC 5084 Query 195048 T 195048 | Sbjct 5085 T 5085 >seq3205 Length=38634 Score = 86.0 bits (94), Expect = 1e-11 Identities = 129/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || ||||||||||| ||| || || | || || ||||| ||||| || ||||| || Sbjct 37386 TTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAATT 37445 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || ||||| || || ||||| || || || || ||||| || ||| || || || Sbjct 37446 AAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCG 37505 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 || ||||| ||| || || |||||||||| ||||| || |||| || || ||| Sbjct 37506 ATTGTGTCGCTCGA---CTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 37562 Query 195130 AA 195131 || Sbjct 37563 AA 37564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109358353929890