Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 116 3e-21
>seq6412
Length=17604
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332
|| ||||||||||| ||||| ||||| | | |||||| |||| || | |||||| ||
Sbjct 16518 GTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCTTCTAGTTGCTTCCCA 16577
Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392
|| || ||||| || || || ||||| || || || || |||||||| |||||| ||
Sbjct 16578 GCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCTTGGATTTTTGACTTG 16637
Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452
||| | || | ||||| |||| || ||||| || || | ||| || || |||| ||
Sbjct 16638 ACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTC 16697
Query 101453 TTTACAAATATCTGCAT 101469
|| || || || |||||
Sbjct 16698 TTGACGAAAATTTGCAT 16714
Score = 86.0 bits (94), Expect = 5e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332
|| || || || ||||| |||||||| | | || | | |||| |||| |||||| ||
Sbjct 16974 GTGGACTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCCAGTTGCTTGCCA 17033
Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392
||||||||||| |||||||| || || || ||||| || || || ||||| || |||
Sbjct 17034 GCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCTTTA 17093
Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
|| | || | ||||| || || || || || |||| || || || ||||
Sbjct 17094 ACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCGTTA 17148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396236526995190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |