Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq6412 116 3e-21 >seq6412 Length=17604 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || ||||||||||| ||||| ||||| | | |||||| |||| || | |||||| || Sbjct 16518 GTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCTTCTAGTTGCTTCCCA 16577 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || ||||| || || || ||||| || || || || |||||||| |||||| || Sbjct 16578 GCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCTTGGATTTTTGACTTG 16637 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | ||||| |||| || ||||| || || | ||| || || |||| || Sbjct 16638 ACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTC 16697 Query 101453 TTTACAAATATCTGCAT 101469 || || || || ||||| Sbjct 16698 TTGACGAAAATTTGCAT 16714 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || || || ||||| |||||||| | | || | | |||| |||| |||||| || Sbjct 16974 GTGGACTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCCAGTTGCTTGCCA 17033 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||||||||| |||||||| || || || ||||| || || || ||||| || ||| Sbjct 17034 GCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCTTTA 17093 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 || | || | ||||| || || || || || |||| || || || |||| Sbjct 17094 ACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCGTTA 17148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396236526995190