Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 102 5e-16
seq3638 87.8 1e-11
>seq6412
Length=17604
Score = 102 bits (112), Expect = 5e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| | || |||||| | ||||||||||| || ||
Sbjct 16493 ACGGAGACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGT 16552
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|||| |||||| |||||||| ||||| || || | ||||| || || || || || ||
Sbjct 16553 TCTGCCATCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACC 16612
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| ||||| || ||| |||||| || || || || | | | | ||| |
Sbjct 16613 CTCCTTATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGA-CTTCTA 16671
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || || ||||| |||||||||||
Sbjct 16672 GCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTG 16711
Score = 102 bits (112), Expect = 5e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| | ||| ||||| | ||||||||||| || ||
Sbjct 16721 ACGGAGACGAAGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCAGACAGCGT 16780
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || || ||||| || |||||||| || | ||||| || || || || || ||
Sbjct 16781 CCGGCCGTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCC 16840
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || || |||||| ||||||| || || ||||| | || | || ||| |
Sbjct 16841 CTCCTTATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAA-CTTCTA 16899
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || || ||||| |||||||||||
Sbjct 16900 GCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTG 16939
>seq3638
Length=54862
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| ||||| || || || || ||||||||||| ||||| ||||| ||||| || |
Sbjct 18503 TTACCGTTCCTGCTTACTTCAACGATTCTCAACGGCAAGCCACTAAGGATGCCGGCCAGA 18444
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
|||| || ||||||||| | || || | ||||| || ||||| || || | || || |
Sbjct 18443 TTGCCGGCCTTAATGTTCTGCGCGTTGTCAATGAGCCCACAGCTGCTGCCTTAGCCTACG 18384
Query 474864 GTCTTGATAAG 474874
|||| || |||
Sbjct 18383 GTCTCGAGAAG 18373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267807301633160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |