Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 91.5 2e-13
>seq6412
Length=17604
Score = 91.5 bits (100), Expect = 2e-13
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | ||||| || || ||||| |||||||||| ||
Sbjct 16714 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTCGAGTCGTCA 16655
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || ||||| |||||||| || || || || || || ||
Sbjct 16654 GACACGATCGATAATGTCAAGTCAAAAATCCAAGATAAGGAGGGTATCCCCCCCGACCAG 16595
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | ||||| | || || ||||| || |||||| |||||| ||||| |||||||
Sbjct 16594 CAACGGTTGATCTTCGCTGGGAAGCAACTAGAAGATGGCAGAACGTTATCTGATTATA-- 16537
Query 156003 ATATCCAAAGAG 156014
||||||||| ||
Sbjct 16536 ATATCCAAAAAG 16525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731792683372000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |