Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 132 9e-26
>seq6412
Length=17604
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||||| | || | ||| ||||||| |||||| |||||||||||||
Sbjct 16713 ATCCCACCACGGAGACGAAGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCA 16772
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || | || |||| |||||| ||||||||||| || | || || || ||
Sbjct 16773 GACAGCGTCCGGCCGTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGG 16832
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || ||||| || || || ||| |||||| || | |||||| || ||
Sbjct 16833 GGGATGCCCTCCTTATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCA 16892
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|||||||| ||||| || || ||||||| || || | || || ||||||
Sbjct 16893 ACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||||| | || | ||| ||||| | ||||| ||||||||||||||||
Sbjct 16488 CCACCACGGAGACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGAT 16547
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| |||| |||| || | ||| || ||||| ||||| || | || || || || ||
Sbjct 16548 AACGTTCTGCCATCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGG 16607
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| || || |||||||| ||||| || |||||| || | |||||||| || |||
Sbjct 16608 ATACCCTCCTTATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACT 16667
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || || ||||||| || || | || || |||||
Sbjct 16668 TCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Score = 93.3 bits (102), Expect = 8e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||||| | || | ||| ||||| | ||| || || || ||||||||||| || ||
Sbjct 16953 AGACGGAGGACGAGATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGATAACGTCCGG 17012
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
|||| |||| ||| || |||||||| || || | |||||| ||||| || || || ||
Sbjct 17013 CCATCCTCCAGTTGCTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCC 17072
Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498
|| || || || ||| ||| || ||| || | || ||| || || ||||| ||
Sbjct 17073 TTGTCCTGAATCTTAGCTTTAACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTG 17132
Query 192499 ATGGTTTTACCAGTTA 192514
||||| || || ||||
Sbjct 17133 ATGGTCTTTCCCGTTA 17148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984370639654500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |