Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5240 93.3 1e-13 >seq5240 Length=8030 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| |||| ||||| ||| | ||||||||||||||| ||| |||||| || Sbjct 4432 AAGAAGGCTGATTGGGCCATTCATTGGATCCAGGACAAGGAGTCGACTTTTGCCCAACGA 4373 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTT 133569 || || || || |||| || ||||| || |||||| ||| | || ||| || || || Sbjct 4372 CTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATT-TGCTTCCATCTT 4314 Query 133570 TTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAG 133629 ||| | || ||||| || | | || ||| || || || || || || ||||| | Sbjct 4313 CTGGTTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCAAATGAGCTGATTTCGCG 4254 Query 133630 GGACGAGGCACTTCACACCGAATTTGCC 133657 ||||||| || |||||||| |||||| Sbjct 4253 TGACGAGGGCCTGCACACCGACTTTGCC 4226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471654104061790