Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 87.8 2e-11
seq2292 87.8 2e-11
>seq5240
Length=8030
Score = 87.8 bits (96), Expect = 2e-11
Identities = 116/157 (74%), Gaps = 13/157 (8%)
Strand=Plus/Plus
Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTG--CCCGAGAAAA 869276
|||||||| | |||||||||||| | ||| ||||||| || || || || |||||||
Sbjct 4284 CCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATGGA--AGCAAATGAACCTGAGAAAA 4341
Query 869277 AGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCT 869336
|||| ||||||||||| || ||| | | || || | |||||| ||||| |||||
Sbjct 4342 AGATACCCTCGACGGCAGCGAAGGCCACCAGTCGTTGGGCAAA--AGTCGA----CTCCT 4395
Query 869337 TG---TTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370
|| | |||||| | || ||||| || ||||| ||
Sbjct 4396 TGTCCTGGATCCAATGAATGGCCCAATCAGCCTTCTT 4432
>seq2292
Length=13796
Score = 87.8 bits (96), Expect = 2e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| ||||| ||||| | ||||| || | ||| | || ||
Sbjct 6209 GACAGCATCGGAGGCACAGTGACCTGCGTTATAAGGAACGTCCCCGTAGGATTGGGGGAA 6150
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| |||||||| || | || || ||| || ||||| ||||| || || || |||
Sbjct 6149 CCATGCTTTGATAAATTGGAAGCTAAGCTGGCTCACGCGATGCTCAGCATTCCCGCAACC 6090
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTTGCGGGT 19199
|| |||||||||||||| || |||||||||
Sbjct 6089 AAAGGATTCGAGATTGGGTCAGGATTTGCGGGT 6057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106427699198390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |