Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6412 104 2e-17 seq4403 104 2e-17 >seq6412 Length=17604 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || ||||| || || || |||||||| ||||| || | | Sbjct 16942 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATCA 16883 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||||||| || || || || || || ||||| || Sbjct 16882 GATACGATCGATAATGTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAG 16823 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| |||||||| |||||||| | | |||| |||||||| Sbjct 16822 CAACGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTATAAT 16763 Query 24884 ATTCAAAAGGAATCGAC 24900 || || || || || || Sbjct 16762 ATCCAGAAAGAGTCTAC 16746 >seq4403 Length=14617 Score = 104 bits (114), Expect = 2e-17 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 24796 AGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855 ||| || || ||||| ||||| || ||||| || | || || ||||| || |||||||| Sbjct 5085 AGATAAGGAGGGAATCCCTCCAGACCAACAGCGGCTAATTTTCGCCGGCAAGCAGCTGGA 5026 Query 24856 GGATT-CGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGT 24914 |||| | || || | ||||||||||||||||| ||||| || || || ||| |||| | Sbjct 5025 GGATGGCCGGACAC-TCTCAGATTATAACATTCAGAAGGAGTCTACTCTCCACCTGGTTT 4967 Query 24915 TGCGATTGCGCGGAGG 24930 |||| |||||||| || Sbjct 4966 TGCGCTTGCGCGGTGG 4951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449848842347600