Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 104 2e-17
seq4403 104 2e-17
>seq6412
Length=17604
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || ||||| || || || |||||||| ||||| || | |
Sbjct 16942 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATCA 16883
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| ||||||||| || || || || || || ||||| ||
Sbjct 16882 GATACGATCGATAATGTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAG 16823
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||||||||| |||||||| |||||||| | | |||| ||||||||
Sbjct 16822 CAACGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTATAAT 16763
Query 24884 ATTCAAAAGGAATCGAC 24900
|| || || || || ||
Sbjct 16762 ATCCAGAAAGAGTCTAC 16746
>seq4403
Length=14617
Score = 104 bits (114), Expect = 2e-17
Identities = 106/136 (78%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 24796 AGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855
||| || || ||||| ||||| || ||||| || | || || ||||| || ||||||||
Sbjct 5085 AGATAAGGAGGGAATCCCTCCAGACCAACAGCGGCTAATTTTCGCCGGCAAGCAGCTGGA 5026
Query 24856 GGATT-CGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGT 24914
|||| | || || | ||||||||||||||||| ||||| || || || ||| |||| |
Sbjct 5025 GGATGGCCGGACAC-TCTCAGATTATAACATTCAGAAGGAGTCTACTCTCCACCTGGTTT 4967
Query 24915 TGCGATTGCGCGGAGG 24930
|||| |||||||| ||
Sbjct 4966 TGCGCTTGCGCGGTGG 4951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449848842347600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |