Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 91.5 2e-12
>seq5240
Length=8030
Score = 91.5 bits (100), Expect = 2e-12
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||| | ||||||||||||||| | |||||| |||||||||||||||||||| ||
Sbjct 4547 GGCTCCTTAATGTAGGTGTCGATGAGCAACGAGTATGTCTCTGAGTGGATGTTTTCCATC 4606
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
|||||| || ||||| |||||
Sbjct 4607 ATGATCTGAAATCCATAGAAGCA 4629
Score = 87.8 bits (96), Expect = 3e-11
Identities = 116/157 (74%), Gaps = 13/157 (8%)
Strand=Plus/Plus
Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTG--CCCGAGAAAA 794437
|||||||| | |||||||||||| | ||| ||||||| || || || || |||||||
Sbjct 4284 CCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATGG--AAGCAAATGAACCTGAGAAAA 4341
Query 794438 AGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT 794497
|||| ||||||||||| || ||| | || || || | ||||||| ||| | ||| |
Sbjct 4342 AGATACCCTCGACGGCAGCGAAGGCCACCAGTCGTTGGGCAAAA--GTCGA----CTCCT 4395
Query 794498 TG---TTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531
|| | |||||| | || ||||| || ||||| ||
Sbjct 4396 TGTCCTGGATCCAATGAATGGCCCAATCAGCCTTCTT 4432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915324132556130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |