Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6412 105 5e-18 >seq6412 Length=17604 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| | || ||||||||||| || |||||||| | | || | Sbjct 16499 ACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCC 16558 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || ||||| | ||||| | |||||| || || || |||||||| || Sbjct 16559 ATCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTT 16618 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | |||| |||||| | || | ||||| || || ||||| || || || Sbjct 16619 ATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAAT 16678 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||||| ||| || || || || ||||| Sbjct 16679 CGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385178495572470