Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 149 1e-30
>seq6412
Length=17604
Score = 149 bits (164), Expect = 1e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | |||| |||||| |||||||| |||||||||||||| || | | ||
Sbjct 16727 ACGAAGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCAGACAGCGTCCGGCC 16786
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || |||||||| ||||||||||| | | ||| || || || || || || |||||
Sbjct 16787 GTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTT 16846
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || ||||||| ||| ||||| || |||||||| | || ||||| | || ||
Sbjct 16847 ATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAAT 16906
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||| || || | ||||| || || || ||||||
Sbjct 16907 CGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943
Score = 138 bits (152), Expect = 2e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | |||| ||| |||||||| || |||||||||||||||| |||| ||
Sbjct 16499 ACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCC 16558
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||||||||| || ||||| ||||| | | ||| || || || || || || |||||
Sbjct 16559 ATCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTT 16618
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|||||| || |||| || ||||| || ||||| || | || ||||| | || ||
Sbjct 16619 ATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAAT 16678
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || | ||||| || || || |||||
Sbjct 16679 CGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981718134339130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |