Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 120 3e-22
seq6412 87.8 2e-12
>seq5240
Length=8030
Score = 120 bits (132), Expect = 3e-22
Identities = 335/512 (65%), Gaps = 9/512 (2%)
Strand=Plus/Plus
Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414
|| |||||||| || ||||| || ||||| ||||| || ||| || || | | |||
Sbjct 3939 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTTTCCATG 3998
Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474
|| || || || ||| || | || ||| ||| | || | ||||| || |
Sbjct 3999 AAATCAAAGGGATTGGTCACATTGTAGTGCTTCTTGTTTCCAAGGGCAACGAGGAGCCTA 4058
Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534
|| || || ||||| ||||| | ||||| || || |||||| || |||| | ||
Sbjct 4059 TCAGCAACGAACTCGATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGAGAAACT 4118
Query 120535 GGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGC 120594
|| | ||| || || ||||| | |||||| | || || || ||| || | |
Sbjct 4119 GGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATATCTTGG 4178
Query 120595 ATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAG 120651
|| | || ||| | || || |||| | | | | ||||| ||||||
Sbjct 4179 ATGACCTCCTTGCTGGGGCGGTGGT-TTAGATGGGAGAACA-----AGAGGCAGGCAAAG 4232
Query 120652 TCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATG 120711
|| ||||||||||||||||| ||||| |||||||| || || |||| ||||||||
Sbjct 4233 TCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCATC 4292
Query 120712 ATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCC 120771
| ||| | |||| | |||| |||| ||||| || || || || | |||||
Sbjct 4293 AAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTCG 4352
Query 120772 ACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTC 120831
||| || ||||| |||| || | ||| || |||| | |||| | |||||| |
Sbjct 4353 ACGGCAGCGAAGGCCACCAGTCGTTGGGCAAAAGTCGACTCCTTGTCCTGGATCCAATGA 4412
Query 120832 ATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
|||||||| || ||||| || || | ||| ||
Sbjct 4413 ATGGCCCAATCAGCCTTCTTACGGATGCAGGG 4444
>seq6412
Length=17604
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||||||||| ||||| ||||| || ||| || | |||||| || || || |
Sbjct 16746 GTAGACTCTTTCTGGATATTATAATCAGACAGCGTCCGGCC--GTCCTCCAGTTGTTTCC 16803
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | ||| ||||||||||| |||||||| ||||| || ||||||| |
Sbjct 16804 CAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTTGATT 16863
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||| || | | ||| || || | || | || || || || || |
Sbjct 16864 TGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTCTTCCCAGTTAGGG 16923
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || |||||||| |||||
Sbjct 16924 TCTTGACGAAAATTTGCAT 16942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483368409270800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |