Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 107 3e-17
>seq5240
Length=8030
Score = 107 bits (118), Expect = 3e-17
Identities = 129/174 (74%), Gaps = 1/174 (1%)
Strand=Plus/Minus
Query 1455897 GTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT 1455956
||||| || || ||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct 4719 GTCCTGGCGTTCTTT-GCCGCGTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGCTT 4661
Query 1455957 TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGA 1456016
| |||||||| | || || || |||| || || || || |||||| || ||
Sbjct 4660 CAGCGGCGAGGTCCAGATCCCTGAAGCTCGTTGCTTCTATGGATTTCAGATCATGATGGA 4601
Query 1456017 AAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|||||||||||| || || |||||| | || |||||||||||| | ||||| ||
Sbjct 4600 AAACATCCACTCAGAGACATACTCGTTGCTCATCGACACCTACATTAAGGAGCC 4547
Score = 86.0 bits (94), Expect = 9e-11
Identities = 116/156 (74%), Gaps = 13/156 (8%)
Strand=Plus/Minus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCG 1456179
|| ||||| || ||||| || | |||||| | ||||||| ||||| ||||||
Sbjct 4432 AAGAAGGCTGATTGGGCCATTCATTGGATCCAGGACAAGGAG----TCGACT-TTTGCCC 4378
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGG--CAGTTTCTGCGC 1456236
| || || || | ||| || || |||||||| ||||||||||| || || || || |
Sbjct 4377 AACGACTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATTTGCTTC-- 4320
Query 1456237 CATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272
|||||| ||| | |||||||||||| | ||||||||
Sbjct 4319 CATCTTCTGGTTGAAGAAGCGCGGCTTGATGCCCGG 4284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176974962564540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |