Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 113 4e-20
seq3205 84.2 2e-11
>seq6412
Length=17604
Score = 113 bits (124), Expect = 4e-20
Identities = 128/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | || || || | || ||||| ||||| || |||||
Sbjct 16979 CTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCCAGTTGCTTGCCAGCAAA 17038
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||||||||||| ||||| | || | || |||||||||| ||| || |||| | ||
Sbjct 17039 TATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCTTTAACGT 17097
Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | | |||||||||||| || ||||| | ||||| || || |||||
Sbjct 17098 TATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCGT 17146
>seq3205
Length=38634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| ||||| ||||| ||| || || || |||| || || ||||| || || || |
Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
| || ||||| || || | |||| | |||||| ||| ||||| ||||| | |
Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGT 37503
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||||||||| || ||||| | || || || |||||||||| || || || |
Sbjct 37504 CGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 37563
Query 35727 A 35727
|
Sbjct 37564 A 37564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450744745243600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |