Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6412 113 4e-20 seq3205 84.2 2e-11 >seq6412 Length=17604 Score = 113 bits (124), Expect = 4e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | || || || | || ||||| ||||| || ||||| Sbjct 16979 CTCCTTCTGTATGTTGTAATCAGATAACGTCCGGCCATCCTCCAGTTGCTTGCCAGCAAA 17038 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||||||||||| ||||| | || | || |||||||||| ||| || |||| | || Sbjct 17039 TATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCTTTAACGT 17097 Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | |||||||||||| || ||||| | ||||| || || ||||| Sbjct 17098 TATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCGT 17146 >seq3205 Length=38634 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| ||||| ||||| ||| || || || |||| || || ||||| || || || | Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | || ||||| || || | |||| | |||||| ||| ||||| ||||| | | Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGT 37503 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||||||||| || ||||| | || || || |||||||||| || || || | Sbjct 37504 CGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 37563 Query 35727 A 35727 | Sbjct 37564 A 37564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450744745243600