Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6412 102 8e-17 >seq6412 Length=17604 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | ||||| || | || ||||| ||||| || || || || | Sbjct 16488 CCACCACGGAGACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGAT 16547 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 |||| | || | || || || || || || || || ||||| || ||||| ||||| || Sbjct 16548 AACGTTCTGCCA-TCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGG 16606 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || ||||| |||||| ||||| || | ||||| ||||| || || Sbjct 16607 GATACCCTCCTTATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGAC 16666 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || |||| || || |||||||||||||| Sbjct 16667 TTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || || ||||| || ||||| ||||| || ||||| ||||| || ||||| || || Sbjct 16787 GTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTT 16846 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || || ||| |||||| || | || || || || || || || || ||||| Sbjct 16847 ATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAAT 16906 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || |||| || || ||||||||||||||| Sbjct 16907 CGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505343627448400