Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 102 8e-17
>seq6412
Length=17604
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | ||||| || | || ||||| ||||| || || || || |
Sbjct 16488 CCACCACGGAGACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGAT 16547
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|||| | || | || || || || || || || || ||||| || ||||| ||||| ||
Sbjct 16548 AACGTTCTGCCA-TCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGG 16606
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| |||||| ||||| || | ||||| ||||| || ||
Sbjct 16607 GATACCCTCCTTATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGAC 16666
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || || |||| || || ||||||||||||||
Sbjct 16667 TTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
||| || || ||||| || ||||| ||||| || ||||| ||||| || ||||| || ||
Sbjct 16787 GTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTT 16846
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|| || || ||| |||||| || | || || || || || || || || |||||
Sbjct 16847 ATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAAT 16906
Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || || |||| || || |||||||||||||||
Sbjct 16907 CGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505343627448400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |