Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 138 2e-27
>seq5240
Length=8030
Score = 138 bits (152), Expect = 2e-27
Identities = 298/444 (67%), Gaps = 4/444 (1%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| || || || || || || |||||||| || || ||||| || |||| |||||| ||
Sbjct 3933 TTCTGATAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTT 3992
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||||||||| ||||| || |||| || | || || ||| | | |
Sbjct 3993 TCCATGAAATCAAAGGGATTGGTCACATTGTAGTGCTTCTTGTTTCCAAGGGCAACGAGG 4052
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||||| ||||| || || |||||| ||||| | | |||||||| | ||
Sbjct 4053 AGCCTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGA 4112
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|||||| || ||||| |||| ||||||| || || | || || || || || ||
Sbjct 4113 GAAACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAAT- 4171
Query 39566 GATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
|| || | ||||| | || || | || || ||| |||| | |||||| |
Sbjct 4172 -ATCTTGGATGACCTCCTTGCTGGGGCGGTGGTTTAGATGGGAGAACAAGAGGCAGGCAA 4230
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
|||| || |||||||| || | ||| | || || || ||||| | ||| ||||
Sbjct 4231 AGTCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCA 4290
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
| | || ||||| || | ||| || |||| |||||| || || || || ||||| || |
Sbjct 4291 TCAAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCT 4350
Query 39744 CTACTGCTGCAAATGCAACAAGTC 39767
| || || || || || || ||||
Sbjct 4351 CGACGGCAGCGAAGGCCACCAGTC 4374
Score = 95.1 bits (104), Expect = 2e-14
Identities = 175/255 (69%), Gaps = 5/255 (2%)
Strand=Plus/Plus
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
||||| ||||||||||| ||| ||||||||||| || || || | ||||||| ||
Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| ||||| | || | || ||| || || || || || ||||| ||||||
Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAA----TTTATTCCA 40089
|| || |||| ||| | ||| || || ||||| ||| | || |||||
Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATC-ATTGTTGAGGCGGTTGTTCCA 4764
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
||| | | |||||| |||| ||| | |||||||| ||||| || ||||| || || ||
Sbjct 4765 GTCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTT 4824
Query 40150 TTTGTACATGTTCCA 40164
|||||||| | |||
Sbjct 4825 CTTGTACATTTGCCA 4839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686834356258800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |