Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2423 116 3e-21 >seq2423 Length=20895 Score = 116 bits (128), Expect = 3e-21 Identities = 331/499 (66%), Gaps = 25/499 (5%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA--AGAAAATGTACGACGTT 19498 ||||| |||||||||||||| |||||||| ||||||||||| |||| || ||| Sbjct 14733 AATGGCCCTGAAATCTTAAACAAATATGTCGGTCAATCGGAGCAGAACATTCGTGAC--C 14790 Query 19499 TGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATT 19557 ||||||| || || || ||||| | ||| | | |||| | | ||| | |||||| Sbjct 14791 TGTTTGCGGATGCAGAGAAAGAATACAAA-GAAAAAGGCGACGAGAGTGGGCTTCACATT 14849 Query 19558 ATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA--------- 19608 |||||| | || ||| | || || || || |||||| | ||| ||| | | Sbjct 14850 ATAATATTTGACGAAATTGATGCTATTTGCAAGCAACGTGGTAGTGGAGCAGGCGGCGGC 14909 Query 19609 AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAA 19668 | |||||| || | || || ||||| || || || ||| | || || || |||| Sbjct 14910 ACTGGAGTCGGCGATAGCGTAGTTAATCAGCTACTTTCGAAACTCGATGGCGTGGACCAG 14969 Query 19669 CTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA-CAGCGCCTT 19727 || || ||| || | |||||||| ||||| || ||| ||| || || || || || Sbjct 14970 CTCAACAATGTTCTTGTTATTGGGATGACGAACAGAAAGGATTTGATCGATGAGGCTCTG 15029 Query 19728 ATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACG 19787 ||| || || || || || ||| || | | ||||| | || || || ||||| Sbjct 15030 ATT-CGGCCTGGACGTTTAGAAGTACATGTGGAAATCTCGCTCCCAGACGAGACGGGACG 15088 Query 19788 TGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGAC-- 19845 || | || || || || |||||| | ||| || ||||| | | | ||| Sbjct 15089 AGTTCAGATCTTGAAGATCCATACACAGAGGATGAGAGAAAAT---GGTGTGATGGACTC 15145 Query 19846 -GATGTAGATCTAGAAGAAATTGCAGCGGCT-ACCAAAAACTATAGCGGCGCAGAACTTG 19903 ||||| ||||| || || | || ||| || |||||||||||| || || ||||| | Sbjct 15146 TGATGTCGATCTCGACGAGCTAGC-GCGTCTGACCAAAAACTATTCTGGTGCTGAACTCG 15204 Query 19904 AGGGATTAGTGAGGGCCGC 19922 ||| | || | |||||| Sbjct 15205 GGGGTCTTGTCAAGGCCGC 15223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397414002563350