Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2423 116 3e-21
>seq2423
Length=20895
Score = 116 bits (128), Expect = 3e-21
Identities = 331/499 (66%), Gaps = 25/499 (5%)
Strand=Plus/Plus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA--AGAAAATGTACGACGTT 19498
||||| |||||||||||||| |||||||| ||||||||||| |||| || |||
Sbjct 14733 AATGGCCCTGAAATCTTAAACAAATATGTCGGTCAATCGGAGCAGAACATTCGTGAC--C 14790
Query 19499 TGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATT 19557
||||||| || || || ||||| | ||| | | |||| | | ||| | ||||||
Sbjct 14791 TGTTTGCGGATGCAGAGAAAGAATACAAA-GAAAAAGGCGACGAGAGTGGGCTTCACATT 14849
Query 19558 ATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA--------- 19608
|||||| | || ||| | || || || || |||||| | ||| ||| | |
Sbjct 14850 ATAATATTTGACGAAATTGATGCTATTTGCAAGCAACGTGGTAGTGGAGCAGGCGGCGGC 14909
Query 19609 AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAA 19668
| |||||| || | || || ||||| || || || ||| | || || || ||||
Sbjct 14910 ACTGGAGTCGGCGATAGCGTAGTTAATCAGCTACTTTCGAAACTCGATGGCGTGGACCAG 14969
Query 19669 CTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA-CAGCGCCTT 19727
|| || ||| || | |||||||| ||||| || ||| ||| || || || || ||
Sbjct 14970 CTCAACAATGTTCTTGTTATTGGGATGACGAACAGAAAGGATTTGATCGATGAGGCTCTG 15029
Query 19728 ATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACG 19787
||| || || || || || ||| || | | ||||| | || || || |||||
Sbjct 15030 ATT-CGGCCTGGACGTTTAGAAGTACATGTGGAAATCTCGCTCCCAGACGAGACGGGACG 15088
Query 19788 TGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGAC-- 19845
|| | || || || || |||||| | ||| || ||||| | | | |||
Sbjct 15089 AGTTCAGATCTTGAAGATCCATACACAGAGGATGAGAGAAAAT---GGTGTGATGGACTC 15145
Query 19846 -GATGTAGATCTAGAAGAAATTGCAGCGGCT-ACCAAAAACTATAGCGGCGCAGAACTTG 19903
||||| ||||| || || | || ||| || |||||||||||| || || ||||| |
Sbjct 15146 TGATGTCGATCTCGACGAGCTAGC-GCGTCTGACCAAAAACTATTCTGGTGCTGAACTCG 15204
Query 19904 AGGGATTAGTGAGGGCCGC 19922
||| | || | ||||||
Sbjct 15205 GGGGTCTTGTCAAGGCCGC 15223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397414002563350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |