Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 102 1e-16
>seq5240
Length=8030
Score = 102 bits (112), Expect = 1e-16
Identities = 278/423 (66%), Gaps = 12/423 (3%)
Strand=Plus/Plus
Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 129786
|||||| || || ||||||||||||||||| || || || |||| ||| | |||||
Sbjct 3938 ATAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTTTCCAT 3997
Query 129787 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGG 129841
|||||||| || || | ||| | | ||| | ||||| ||||
Sbjct 3998 GAAATCAAAGGGATTGGTCACATTGTAGTGCTTCTTGTT-----TCCAAGGGCAACGAGG 4052
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| | ||| | ||| |||| ||||| | | ||||| || |||||||| |||| ||
Sbjct 4053 AGCCTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGA 4112
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
| ||| || || || | |||| | | |||||| | ||||| || | ||
Sbjct 4113 GAAACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATA 4172
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGA-GTTCCACGGCAAA 130020
| || ||| |||| ||| || | | | | | ||| | | || ||||||
Sbjct 4173 TCTTGGATGACCTCCTTGCTGGGGCGGTGGTTTAGATGGGAGAACAAGAGGCA-GGCAAA 4231
Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080
|| ||| || ||||||||||| || || || ||||| ||||| || || |||||
Sbjct 4232 GTCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCAT 4291
Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
| || ||||||||||||||||| || | | |||||| || ||||| ||||| |||||
Sbjct 4292 CAAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTC 4351
Query 130141 CAC 130143
||
Sbjct 4352 GAC 4354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618368177085200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |