Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5240 91.5 2e-13 >seq5240 Length=8030 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGA--GTCCTGGAG-CATCATTTGCACAACGTCTC 59987 || || || |||||||| || ||||| | | |||| | | ||||| ||||| || Sbjct 4429 AAGGCTGATTGGGCCATTCATTGGATCCAGGACAAGGAGTCGACTTTTGCCCAACGACTG 4370 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 | || || || ||| || || ||||| ||||| || || || | | || |||||| Sbjct 4369 GTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATTTGCTTCCATCTTCTGG 4310 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGAC 60107 | || ||||| ||| | ||||| || ||| ||||| || ||||||||||| || ||| Sbjct 4309 TTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCAAATGAGCTGATTTCGCGTGAC 4250 Query 60108 GAGGGCCTCCA 60118 |||||||| || Sbjct 4249 GAGGGCCTGCA 4239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548465353624800