Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq4403 109 3e-19
seq6412 93.3 3e-14
>seq4403
Length=14617
Score = 109 bits (120), Expect = 3e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
||||| |||| |||||||| |||||| ||||||||||||||||| ||||| || |
Sbjct 4963 CGCAAAACCAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCTGAGAGTGTCCGGCCA 5022
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
|| || || || || ||||| || |||| ||||||||||| || || | |||||||||
Sbjct 5023 TCCTCCAGCTGCTTGCCGGCGAAAATTAGCCGCTGTTGGTCTGGAGGGATTCCCTCCTTA 5082
Query 34612 TCTGT 34616
|||||
Sbjct 5083 TCTGT 5087
>seq6412
Length=17604
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||||| | || | ||| | |||| |||||| || ||||| ||||| ||
Sbjct 16944 CCGCCACGGAGACGGAGGACGAGATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGAT 17003
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | || || ||||| || || |||||||| || ||||||||||| || ||
Sbjct 17004 AACGTCCGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGG 17063
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTC-TTCGCTCTCCA 34657
| ||||||||||| ||| || | ||||||| || ||| ||||| ||| ||| |
Sbjct 17064 ATGCCCTCCTTGTC-CTGAATCTTAGCTTTAACGTTATCAATCGTGTCGCTCG-ACTCGA 17121
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTA 34684
| || | ||| || || || || ||||
Sbjct 17122 CCTCTAGGGTGATGGTCTTTCCCGTTA 17148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314696343900110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |