Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6412 96.9 3e-15 seq3205 96.9 3e-15 >seq6412 Length=17604 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || || ||| | || || || || || || || |||| ||||||| | || ||| Sbjct 17146 ACGGGAAAGACCATCACCCTAGAGGTCGAGTCGAGCGACACGATTGATAACGTTAAAGCT 17087 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| || ||||| || || || |||||||| || |||| || ||||| Sbjct 17086 AAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGGTTGATATTTGCTGGCAAG 17027 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 ||| |||| || | ||| | || ||||||||||| || |||||||| || || ||| Sbjct 17026 CAACTGGAGGATGGCCGGACGTTATCTGATTACAACATACAGAAGGAGTCCACTTTGCAT 16967 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || || || || Sbjct 16966 CTCGTCCTCCGTCTCCGTGGCGGAAT 16941 >seq3205 Length=38634 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || ||||| || ||| | ||||| ||||| || || || |||| | || Sbjct 37564 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTTGAGGTAGAGTCGAGCGACACAATC 37505 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || || || ||||| || || || || || ||||||||||||||||||||| Sbjct 37504 GACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGGATTCCACCCGATCAACAGCGTTTA 37445 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | |||||| || ||| | || ||| || ||| | ||| ||||| ||||| ||| Sbjct 37444 ATTTTCGCCGGAAAGCAACTCGAGGACGGTCGGACACTGAACGACTACAATATTCAGAAG 37385 Query 27177 G 27177 | Sbjct 37384 G 37384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434871265718400