Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 96.9 3e-15
seq3205 96.9 3e-15
>seq6412
Length=17604
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| || ||| | || || || || || || || |||| ||||||| | || |||
Sbjct 17146 ACGGGAAAGACCATCACCCTAGAGGTCGAGTCGAGCGACACGATTGATAACGTTAAAGCT 17087
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || || || |||||||| || |||| || |||||
Sbjct 17086 AAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGGTTGATATTTGCTGGCAAG 17027
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| |||| || | ||| | || ||||||||||| || |||||||| || || |||
Sbjct 17026 CAACTGGAGGATGGCCGGACGTTATCTGATTACAACATACAGAAGGAGTCCACTTTGCAT 16967
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | ||| | || || || ||
Sbjct 16966 CTCGTCCTCCGTCTCCGTGGCGGAAT 16941
>seq3205
Length=38634
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || ||||| || ||| | ||||| ||||| || || || |||| | ||
Sbjct 37564 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTTGAGGTAGAGTCGAGCGACACAATC 37505
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | || || || ||||| || || || || || |||||||||||||||||||||
Sbjct 37504 GACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGGATTCCACCCGATCAACAGCGTTTA 37445
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | |||||| || ||| | || ||| || ||| | ||| ||||| ||||| |||
Sbjct 37444 ATTTTCGCCGGAAAGCAACTCGAGGACGGTCGGACACTGAACGACTACAATATTCAGAAG 37385
Query 27177 G 27177
|
Sbjct 37384 G 37384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434871265718400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |