Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 89.7 4e-13
>seq6412
Length=17604
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGC 27846
|||||||||||| || || || || |||||||| ||||| | || || || | |
Sbjct 16943 AATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATC 16884
Query 27847 ACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
| ||||| | ||| |||||| ||| || || || || || | || ||
Sbjct 16883 AGATACGATCGATAAT--GTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGAC 16826
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
||||||||||| || ||||| || |||||| |||| |||| || | |||| |||||
Sbjct 16825 CAGCAACGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTAT 16766
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| ||||| |||||| ||||||||| | || | ||| | ||||| ||
Sbjct 16765 AATATCCAGAAAGAGTCTACTTTGCATCTCGTCCTTCGTCTCCGTGGTGG 16716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355824797577090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |