Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 86.0 5e-12
>seq6412
Length=17604
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || ||||||||||| | || || || |||| || || ||||| || |||||
Sbjct 16751 CTCTTTCTGGATATTATAATCAGACAGCGTCCGGCCGTCCTCCAGTTGTTTCCCAGCAAA 16810
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| | || |||||||||| ||| | || ||| || ||| ||| || ||||| |
Sbjct 16811 GATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTTGATTTGACATT 16870
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | |||||| ||||| || || | ||| || | || || || || || || ||
Sbjct 16871 ATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGAC 16930
Query 39273 AAAGATTTGCAT 39284
|| ||||||||
Sbjct 16931 GAAAATTTGCAT 16942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429500211795710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |