Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 109 5e-19
>seq5240
Length=8030
Score = 109 bits (120), Expect = 5e-19
Identities = 178/256 (70%), Gaps = 3/256 (1%)
Strand=Plus/Plus
Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907
|| || || || ||||| || ||||||||||| || ||||| | |||||| | |
Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645
Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967
|| || ||| | || | || || | ||| ||||| || || || || || |||
Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705
Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAG 5024
|| ||||||| ||| | || || |||||| | || ||| || | | || ||||||
Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGCGGTTGTTCCAG 4765
Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084
| ||| |||||| | || ||||| |||||| | ||||| || |||||||| |||||
Sbjct 4766 TCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTTC 4825
Query 5085 TTGTACATAGACCAAA 5100
|||||||| |||||
Sbjct 4826 TTGTACATTTGCCAAA 4841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427004475537110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |