Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5240 86.0 9e-12 >seq5240 Length=8030 Score = 86.0 bits (94), Expect = 9e-12 Identities = 174/255 (68%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 || ||||| || ||||| || ||||||||||| || || || | ||||| | |||| Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || ||||| | || || || ||| ||||| || || || ||||| || ||| Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705 Query 48558 AAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTG-GAAGTCAGTTTATTCCA 48613 || || || | ||| | ||| || || | || ||| || | | || ||||| Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGC-GGTTGTTCCA 4764 Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673 ||| | | |||||| |||| ||| | |||||||| ||||| ||||| || || ||||| Sbjct 4765 GTCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTT 4824 Query 48674 TTTATACATATTCCA 48688 || ||||| | ||| Sbjct 4825 CTTGTACATTTGCCA 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694593515268800