Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 86.0 9e-12
>seq5240
Length=8030
Score = 86.0 bits (94), Expect = 9e-12
Identities = 174/255 (68%), Gaps = 5/255 (2%)
Strand=Plus/Plus
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
|| ||||| || ||||| || ||||||||||| || || || | ||||| | ||||
Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| ||||| | || || || ||| ||||| || || || ||||| || |||
Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705
Query 48558 AAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTG-GAAGTCAGTTTATTCCA 48613
|| || || | ||| | ||| || || | || ||| || | | || |||||
Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGC-GGTTGTTCCA 4764
Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673
||| | | |||||| |||| ||| | |||||||| ||||| ||||| || || |||||
Sbjct 4765 GTCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTT 4824
Query 48674 TTTATACATATTCCA 48688
|| ||||| | |||
Sbjct 4825 CTTGTACATTTGCCA 4839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694593515268800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |