Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5240 105 1e-17 >seq5240 Length=8030 Score = 105 bits (116), Expect = 1e-17 Identities = 176/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 ||||| || |||||||| || ||||||||||| || || || | ||||||| ||| Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || ||||| | || || || || ||||| || || || ||||| || ||| Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAG 47103 || || |||| ||| | ||| || || ||||| | | || || |||||| Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGCGGTTGTTCCAG 4765 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | |||||| |||| ||| | |||||||| |||||||||||||| || ||||| Sbjct 4766 TCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTTC 4825 Query 47164 TTATACATATTCCA 47177 || ||||| | ||| Sbjct 4826 TTGTACATTTGCCA 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712857135734400