Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 105 1e-17
>seq5240
Length=8030
Score = 105 bits (116), Expect = 1e-17
Identities = 176/254 (69%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
||||| || |||||||| || ||||||||||| || || || | ||||||| |||
Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645
Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| ||||| | || || || || ||||| || || || ||||| || |||
Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705
Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAG 47103
|| || |||| ||| | ||| || || ||||| | | || || ||||||
Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGCGGTTGTTCCAG 4765
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
|| | | |||||| |||| ||| | |||||||| |||||||||||||| || |||||
Sbjct 4766 TCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTTC 4825
Query 47164 TTATACATATTCCA 47177
|| ||||| | |||
Sbjct 4826 TTGTACATTTGCCA 4839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712857135734400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |