Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 143 6e-29
>seq6412
Length=17604
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| | ||| || ||||||||||| || ||||| | ||| ||||| ||||||
Sbjct 16503 AGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCT 16562
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
||||| ||||| |||||||| | || |||||||| | | ||| || ||||| |||
Sbjct 16563 TCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCT 16622
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| |||||| |||||| | || | ||||||| ||| ||||| || ||||| ||
Sbjct 16623 TGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTC 16682
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| ||||| | |||||
Sbjct 16683 TTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| | |||||||||||| ||||| || ||||| | | || | || ||
Sbjct 16731 AGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCAGACAGCGTCCGGCCGTCC 16790
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| | || |||||||| | | ||| || ||||| ||
Sbjct 16791 TCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCC 16850
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || ||| ||||||| | || | | ||||| ||| ||||| || ||||| ||
Sbjct 16851 TGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTC 16910
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || ||||| ||||| | ||||||
Sbjct 16911 TTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153692628537570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |