Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6412 143 6e-29 >seq6412 Length=17604 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| | ||| || ||||||||||| || ||||| | ||| ||||| |||||| Sbjct 16503 AGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCT 16562 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||||| |||||||| | || |||||||| | | ||| || ||||| ||| Sbjct 16563 TCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCT 16622 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || |||||| |||||| | || | ||||||| ||| ||||| || ||||| || Sbjct 16623 TGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTC 16682 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| | ||||| Sbjct 16683 TTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| | |||||||||||| ||||| || ||||| | | || | || || Sbjct 16731 AGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCAGACAGCGTCCGGCCGTCC 16790 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || |||||| || ||||| | || |||||||| | | ||| || ||||| || Sbjct 16791 TCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCC 16850 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||||||| | || | | ||||| ||| ||||| || ||||| || Sbjct 16851 TGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTC 16910 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || ||||| ||||| | |||||| Sbjct 16911 TTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153692628537570