Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 179 8e-40
seq3205 98.7 2e-15
>seq6412
Length=17604
Score = 179 bits (198), Expect = 8e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| || ||||| || || |||||||||||| || || ||||
Sbjct 16488 CCACCACGGAGACGAAGGACGAGATGCAAAGTCGATTCTTTTTGGATATTATAATCAGAT 16547
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| ||| | |||||| |||||||| ||||| || |||||||| ||||| ||||| ||
Sbjct 16548 AACGTTCTGCCATCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGG 16607
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||| |||||||| |||| || || ||||||| ||||| || | ||||||
Sbjct 16608 ATACCCTCCTTATCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACT 16667
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || |||||||| || || | ||||| ||||| || |||||
Sbjct 16668 TCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| || ||||| || || ||||| ||||| || || ||||
Sbjct 16716 CCACCACGGAGACGAAGGACGAGATGCAAAGTAGACTCTTTCTGGATATTATAATCAGAC 16775
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||| ||||| ||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 16776 AGCGTCCGGCCGTCCTCCAGTTGTTTCCCAGCAAAGATCAACCGTTGCTGGTCGGGGGGG 16835
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||| || |||||||||| ||| || ||||||| || || || | || |||
Sbjct 16836 ATGCCCTCCTTATCCTGGATCTTTGATTTGACATTATCGATCGTATCTGATGACTCAACT 16895
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || || |||||||| || || | ||||| ||||| || ||||||
Sbjct 16896 TCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCATT 16943
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || || ||||| || ||| || || || |||||||| ||||
Sbjct 16944 CCGCCACGGAGACGGAGGACGAGATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGAT 17003
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| ||| ||||||||||| ||||| || || ||||| ||||| || ||||||||| ||
Sbjct 17004 AACGTCCGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGG 17063
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| ||||| ||| |||| || ||||| | |||||
Sbjct 17064 ATGCCCTCCTTGTCCTGAATCTTAGCTTTAACGTTATCAATCGTGTCGCTCGACTCGACC 17123
Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| |||||
Sbjct 17124 TCTAGGGTGATGGTCTTTCCCGT 17146
>seq3205
Length=38634
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| || || |||||||| || || || || ||||| ||||| || ||||| || ||
Sbjct 37386 TTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAATT 37445
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
||||| ||||| || ||||| |||||||| || || ||||| | || || | |||
Sbjct 37446 AAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCG 37505
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | || || || || || || ||||||||||||| ||||| |||||
Sbjct 37506 ATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 37564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046622923630180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |