Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5240 122 9e-23 >seq5240 Length=8030 Score = 122 bits (134), Expect = 9e-23 Identities = 305/461 (66%), Gaps = 8/461 (2%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||| ||||| || ||||| || || ||||| | ||||| || || || ||||| | Sbjct 3920 CATGACACCGGCCTTCTGATAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGC 3979 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 || |||||| ||||||| |||||||| ||||| | ||| || |||| | || Sbjct 3980 CAAAGATATACTTTCCATGAAATCAAAGGGATTGGTCACATTGTAGT--GCTT--CTTGT 4035 Query 23325 T----AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380 | | | | |||||||| || || || || || ||||||||||||| | Sbjct 4036 TTCCAAGGGCAACGAGGAGCCTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCG 4095 Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440 |||| || || | || ||||||| || || |||||| || ||||| | || Sbjct 4096 AGTTCATTCCGAGCAGAGAAACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAA 4155 Query 23441 CAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAA 23500 |||| || | || || | || || || | || || | | |||| || | Sbjct 4156 CAGCGTCAGTGATAATATCTTGGATGACCTCCTTGCTGGGGCGGTGGTTTAGATGGGAGA 4215 Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 |||| | || ||||| || || ||||| || || | ||||| ||||| || | Sbjct 4216 ACAAGAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGA 4275 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGG 23620 |||| ||||| ||||| || || || || || | ||| || || | ||||||||| || | Sbjct 4276 ATGTCAATCCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTG 4335 Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGT 23661 | || || |||||||| || || || |||||||| || ||| Sbjct 4336 AGAAAAAGATACCCTCGACGGCAGCGAAGGCCACCAGTCGT 4376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521431483738000