Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 122 9e-23
>seq5240
Length=8030
Score = 122 bits (134), Expect = 9e-23
Identities = 305/461 (66%), Gaps = 8/461 (2%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||| ||||| || ||||| || || ||||| | ||||| || || || ||||| |
Sbjct 3920 CATGACACCGGCCTTCTGATAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGC 3979
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|| |||||| ||||||| |||||||| ||||| | ||| || |||| | ||
Sbjct 3980 CAAAGATATACTTTCCATGAAATCAAAGGGATTGGTCACATTGTAGT--GCTT--CTTGT 4035
Query 23325 T----AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380
| | | | |||||||| || || || || || ||||||||||||| |
Sbjct 4036 TTCCAAGGGCAACGAGGAGCCTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCG 4095
Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440
|||| || || | || ||||||| || || |||||| || ||||| | ||
Sbjct 4096 AGTTCATTCCGAGCAGAGAAACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAA 4155
Query 23441 CAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAA 23500
|||| || | || || | || || || | || || | | |||| || |
Sbjct 4156 CAGCGTCAGTGATAATATCTTGGATGACCTCCTTGCTGGGGCGGTGGTTTAGATGGGAGA 4215
Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560
|||| | || ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 4216 ACAAGAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGA 4275
Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGG 23620
|||| ||||| ||||| || || || || || | ||| || || | ||||||||| || |
Sbjct 4276 ATGTCAATCCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTG 4335
Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGT 23661
| || || |||||||| || || || |||||||| || |||
Sbjct 4336 AGAAAAAGATACCCTCGACGGCAGCGAAGGCCACCAGTCGT 4376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521431483738000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |