Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 93.3 3e-14
>seq6412
Length=17604
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||| || ||||| || ||||| | || || |||| ||||| || ||||| |||||
Sbjct 16751 CTCTTTCTGGATATTATAATCAGACAGCGTCCGGCCGTCCTCCAGTTGTTTCCCAGCAAA 16810
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||| || ||||| || | || | || ||||| ||| ||||| || || | |
Sbjct 16811 GATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT-TGATTTGACAT 16869
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | || || || | || || || || | |||||||||||| || || |||||||| |
Sbjct 16870 TATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGA 16929
Query 44325 CGAAGATTTGCAT 44337
|||| ||||||||
Sbjct 16930 CGAAAATTTGCAT 16942
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || || |||||||| || |||||||| || ||||| || | || | ||| |||||
Sbjct 16560 TCTTCTAGTTGCTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTA 16619
Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
|| || || ||| | | | || ||||| | || || || || | |||||||
Sbjct 16620 TCTTGGATTTTTGACTTGACATTATCGATCGTGTCTGACGACTCGACTTCTAGCGTAATC 16679
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || |||||||| ||||| ||||||||
Sbjct 16680 GTCTTCCCAGTTAGGGTCTTGACGAAAATTTGCAT 16714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359952361389390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |