Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 138 3e-27
seq4403 86.0 2e-11
>seq6412
Length=17604
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || ||||| || || || || || ||||||
Sbjct 16711 CAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTCGAGTCGTCAGAC 16652
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||| || || || || || || ||||| || |||||||||
Sbjct 16651 ACGATCGATAATGTCAAGTCAAAAATCCAAGATAAGGAGGGTATCCCCCCCGACCAGCAA 16592
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || |||||||| || || | | |||||||| ||
Sbjct 16591 CGGTTGATCTTCGCTGGGAAGCAACTAGAAGATGGCAGAACGTTATCTGATTATAATATC 16532
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| || ||||||| ||
Sbjct 16531 CAAAAAGAATCGACTTTGCATCTCGT 16506
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || ||||| || || || || || |||||
Sbjct 16939 CAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATCAGAT 16880
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| |||||| ||||| || || || ||||| || |||||||||
Sbjct 16879 ACGATCGATAATGTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAA 16820
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || || || || |||| || | |||||||| ||
Sbjct 16819 CGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTATAATATC 16760
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || ||||||| ||
Sbjct 16759 CAGAAAGAGTCTACTTTGCATCTCGT 16734
Score = 93.3 bits (102), Expect = 1e-13
Identities = 134/188 (71%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001
|| ||||| || |||||||| ||||| || ||| ||||| || || ||||| |||
Sbjct 17146 ACGGGAAAGACCATCACCCTAGAGGTCGAGTCGAGC---GACACGATTGATAACGTTAAA 17090
Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061
|||||||||||||| || || ||||| || ||||| || || | || || || ||
Sbjct 17089 GCTAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGGTTGATATTTGCTGGC 17030
Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121
|| || || || ||||| |||| | | ||||| ||| | || || || || || ||
Sbjct 17029 AAGCAACTGGAGGATGGCCGGACGTTATCTGATTACAACATACAGAAGGAGTCCACTTTG 16970
Query 178122 CATCTTGT 178129
||||| ||
Sbjct 16969 CATCTCGT 16962
>seq4403
Length=14617
Score = 86.0 bits (94), Expect = 2e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
|| || || ||||||||||| ||||| || || || || |||||||| || ||||| ||
Sbjct 5084 GATAAGGAGGGAATCCCTCCAGACCAACAGCGGCTAATTTTCGCCGGCAAGCAGCTGGAG 5025
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| |||| || | ||||||||| | || || || || || || || || ||||||
Sbjct 5024 GATGGCCGGACACTCTCAGATTATAACATTCAGAAGGAGTCTACTCTCCACCTGGTTTTG 4965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203597484271980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |