Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq79 219 5e-52 >seq79 Length=405269 Score = 219 bits (242), Expect = 5e-52 Identities = 480/719 (67%), Gaps = 0/719 (0%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | |||| |||| || || ||||| || || | | | | Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || || | | || || ||||||||||| ||||| || |||| ||||| | || Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | | | | |||||| ||||| ||||| ||| || | ||| | | Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 ||||| | |||||||| || | ||| || | | | |||| ||||| ||||| |||||| Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | |||||||| ||||| || |||||| || ||| |||| || || ||||| Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | ||||| || |||| || || ||| || ||||||| ||| || || Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || || | || || || || || || || ||||| || || || ||||| Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 ||||| || ||| |||||| | || || || || ||| || | | || || Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 ||||| || | |||||||||||| ||||| || |||||| ||| | || || || || Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469 Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550 ||||| || |||| ||| | |||||||| || || |||||||| | |||||| Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529 Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610 || || | |||| | | ||| ||| ||| ||||| || || |||||||| || Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589 Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATC 54669 || || || || | ||| ||||| || || || | ||| | || || | || ||| Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATC 294648 Score = 100 bits (110), Expect = 3e-16 Identities = 136/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 53701 CAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT-TAGCATCCGCATATTGTATTA 53759 ||| |||||||| ||||| |||||||| || || |||| | || | ||||| || | Sbjct 293616 CAAAGCAATAGACGCCAGGTTACAAACTGCAACTTCATCTGGCGAGCA-ATATTCGATGA 293674 Query 53760 TCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 53819 |||||||||| || ||| | | || || || | || | |||||| ||||| |||| Sbjct 293675 TCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATTGCTCTTCTTGT 293734 Query 53820 TACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCG 53879 | ||||| ||||| ||||| || ||||| ||||||| ||| | || | ||| | ||| | Sbjct 293735 TGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGCTTCAAGAATAG 293794 Query 53880 CTTTCCA 53886 | | ||| Sbjct 293795 CATACCA 293801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720798475840