Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq73 172 6e-38
seq103 116 4e-21
seq75 116 4e-21
seq49 98.7 1e-15
>seq73
Length=4627324
Score = 172 bits (190), Expect = 6e-38
Identities = 211/285 (74%), Gaps = 5/285 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||||||||| || ||||||||||||||||||| || || | || ||
Sbjct 220406 ATTTGGCAAATGTACAAAAAAGCAGAGGCGTCGTTCTGGACCGCAGAAGAAATTGATCTC 220465
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| || ||| ||||||| | | ||||| || ||||||| | ||||||
Sbjct 220466 TCAAAAGACCTTCACGACTGGAACAACAGATTGAATGATGACGAGCGGTACTTCATCTCA 220525
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||| || |||||||| || |||||||||||||| || ||||||||||||
Sbjct 220526 CACGTCTTGGCATTCTTCGCCGCGTCGGATGGCATCGTCAACGAAAACCTGGTCGAGCGT 220585
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | || || ||||| ||||||| || |||||||||||||| |||||| ||
Sbjct 220586 TTCAGCGGA-GAAGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 220644
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
||| || | ||||| || | || || |||||||||||| ||
Sbjct 220645 GGAAAATATTCACTCTGAGACCTACTCCCTCCTCATCGACACATA 220689
Score = 145 bits (160), Expect = 8e-30
Identities = 312/458 (68%), Gaps = 10/458 (2%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
||||||| || ||||| | || ||||||| | | ||| || |||| | |||| |
Sbjct 220812 AGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACCTTTGCACAGCGTC 220871
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || |||||||| |||||||| ||| ||||||| || ||||| | || || |
Sbjct 220872 TCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCGATCTTCT 220931
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|| | |||||||| ||||||||||| ||||| || || |||||||| || || | |
Sbjct 220932 GGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATTTCTCGTG 220991
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||| | || || || |||||| | || ||| || ||| || || || |
Sbjct 220992 ACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCTCACTTGCGTCACCGTCCCA 221051
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| | | ||| | |||| |||| || || ||| | ||||||||| |||||
Sbjct 221052 GCCAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTTT 221111
Query 117282 CCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
| || || || ||||| ||| || || ||| | || || || | |||| ||||||||
Sbjct 221112 CAGATGCTCTCCCGGTCGCG-CTTCTTGGAATGAA-CGCCAAGCTCATGTGCCAATACAT 221169
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCA---CTACAACAC 117396
||||||||||| || | || || | ||| | ||| |||| | ||| ||| |
Sbjct 221170 TGAGTTCGTCGCTGATCGCCTCCTCGT--TGCT-TTGGGCAACAAGAAAGTCTATAACTC 221226
Query 117397 GCCCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||||| | ||||| ||| || ||||||| |||
Sbjct 221227 CACCAACCCATTTGACTTCATGGACAACATCTCCCTGG 221264
>seq103
Length=249856
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 40694 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751
||||| ||||| || || || |||||||| ||||||||| | || ||||| ||| |||
Sbjct 43384 AAATAGCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGA 43325
Query 40752 CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811
|| | | | ||||| ||||| | ||||| ||||||||||| | ||||||||
Sbjct 43324 CACTATCGACAATGTCAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCCGACCAGCA 43265
Query 40812 ACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 40871
||| | |||| ||| ||||| ||||| || |||| || || || | ||| || |||||
Sbjct 43264 GCGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGCGATTATAACAT 43205
Query 40872 CCAGAAGG-AGGC 40883
||||||| ||||
Sbjct 43204 TCAGAAGGTAGGC 43192
>seq75
Length=1151455
Score = 116 bits (128), Expect = 4e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || || || || |||||||| || || | || |||||| | |
Sbjct 639166 AATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTC 639107
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|| | | | | |||| | || | |||| ||| || ||||| || ||||| | ||||
Sbjct 639106 AGATACCATTGACAACGTTAAAAGCAAAA-TTCAAGATAAAGAAGGTATCCCACCAGACC 639048
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||||||||||||| ||| || |||||||| || |||| || || ||| |||||||
Sbjct 639047 AGCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACA 638988
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
| ||||| || || |||| || || || ||
Sbjct 638987 ATATCCAAAAAGAATCCACACTCCACCTTGT 638957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825
||||| ||||| | ||||| || || ||||| | ||||||||||| || |||| ||
Sbjct 639632 TCAAGTCCAAAATCCAGGACAAGGAAGGTATCCCTCCTGACCAGCAACGCCTTATCTTCG 639573
Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885
| ||||| || ||||| |||| || ||||| ||||||||||||||||||||| | |
Sbjct 639572 CTGGCAAGCAACTGGAAGACGGCCGTACCCTGTCAGACTACAACATCCAGAAGGAGTCTA 639513
Query 40886 CGCTGCA 40892
| || ||
Sbjct 639512 CCCTTCA 639506
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| ||||| ||||| ||||| || || ||| | || || ||| | | || | | |
Sbjct 639383 TCGTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCG 639324
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| | ||| ||||| | || ||||| ||||||||| | ||||||||||| |
Sbjct 639323 ACAACG-TAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTG 639265
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || ||||| || || | || ||| | ||| || |||||||| ||
Sbjct 639264 ATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAA 639205
Query 40879 GAGGCCACGCTGCATCTAGT 40898
|| |||| || ||||| ||
Sbjct 639204 GAATCCACCCTCCATCTTGT 639185
>seq49
Length=1984306
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||||||||| |||||| | ||||||||||| || |||| ||| ||||||||||| ||
Sbjct 95490 GACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGAG 95431
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | || ||||| |||||||||||| || || ||| | || || || || || ||
Sbjct 95430 GATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCTG 95371
Query 40903 CG 40904
||
Sbjct 95370 CG 95369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218504454080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |