Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq75 143 2e-29 seq49 95.1 1e-14 seq103 93.3 4e-14 >seq75 Length=1151455 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || |||||||||||||| |||| || ||| || |||||||| ||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || ||||| || ||||| ||||||||||||||||||| || || Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||| ||| ||||| ||| || | || | ||||| | ||||||||| Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||||||||||||||||| || || |||||||| Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 123 bits (136), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA--TCCTCGAGC 118592 ||||| ||| || |||||||| || ||||| || | | |||| || ||||| ||| Sbjct 638962 GTGGAGTGTGGATTCTTTTTGGATATTGTAGTC--TGAGAGTGTTCGGCCGTCCTCAAGC 639019 Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652 |||||||| ||| ||||||| || ||||| || || || || || || || ||| |||| Sbjct 639020 TGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATT 639079 Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712 || |||||| | || | ||| || | ||| ||||| || | || | |||||||||| Sbjct 639080 TTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCG 639139 Query 118713 GTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || |||||||| Sbjct 639140 GTCAGGGTCTTAACGAAGATCTGCAT 639165 >seq49 Length=1984306 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||||||||||||||| ||| | || || ||||||||||||||| || Sbjct 95387 GTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCGAGCTGTTTGCCG 95446 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| |||| || || ||||| ||||| || || ||||| |||||||| Sbjct 95447 GCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTCTGT 95493 >seq103 Length=249856 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || |||||||| |||||||| | || || ||||| ||||| || || ||| |||| Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | |||||||| ||||| || |||||||||||||| ||||| || || | ||| Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||| || ||||||||| | ||| | || ||||| || || || || || || Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829828970736