Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq75 143 2e-29
seq49 95.1 1e-14
seq103 93.3 4e-14
>seq75
Length=1151455
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || |||||||||||||| |||| || ||| || |||||||| |||||
Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||| || ||||| || ||||| ||||||||||||||||||| || ||
Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||| ||| ||||| ||| || | || | ||||| | |||||||||
Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | |||||||||||||||||||| || || ||||||||
Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 123 bits (136), Expect = 2e-23
Identities = 152/206 (74%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA--TCCTCGAGC 118592
||||| ||| || |||||||| || ||||| || | | |||| || ||||| |||
Sbjct 638962 GTGGAGTGTGGATTCTTTTTGGATATTGTAGTC--TGAGAGTGTTCGGCCGTCCTCAAGC 639019
Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652
|||||||| ||| ||||||| || ||||| || || || || || || || ||| ||||
Sbjct 639020 TGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATT 639079
Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712
|| |||||| | || | ||| || | ||| ||||| || | || | ||||||||||
Sbjct 639080 TTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCG 639139
Query 118713 GTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || ||||||||
Sbjct 639140 GTCAGGGTCTTAACGAAGATCTGCAT 639165
>seq49
Length=1984306
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||||||||||||||| ||| | || || ||||||||||||||| ||
Sbjct 95387 GTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCGAGCTGTTTGCCG 95446
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||| |||| || || ||||| ||||| || || ||||| ||||||||
Sbjct 95447 GCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTCTGT 95493
>seq103
Length=249856
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| |||||||| |||||||| | || || ||||| ||||| || || ||| ||||
Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| |||||||| ||||| || |||||||||||||| ||||| || || | |||
Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| || ||||||||| | ||| | || ||||| || || || || || ||
Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829828970736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |