Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq103 116 4e-21 seq75 116 4e-21 >seq103 Length=249856 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| ||||| || ||||| || ||||| |||| || |||||||| || ||||| | Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | |||||||||||||| || | || |||||||||| |||||| |||| | Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||||| || || || || | |||||||| ||||||||||| ||||| || | Sbjct 43317 CGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 43376 Query 43174 AG 43175 || Sbjct 43377 AG 43378 >seq75 Length=1151455 Score = 116 bits (128), Expect = 4e-21 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||| | ||||||||||| ||||| || ||||||| || ||||| | || Sbjct 638725 CAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATC 638784 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 ||||||||||||||||| || ||||| |||||||| || | || | | ||||| || Sbjct 638785 TTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATC 638844 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGAT 43147 |||||| ||| | | | | ||||| |||| || || || | ||||| Sbjct 638845 TTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTC---TCGACTTCAAGTGTGAT 638901 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| || || || || || ||||| ||||| Sbjct 638902 AGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816828046240