Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq73 104 5e-17 seq79 98.7 2e-15 >seq73 Length=4627324 Score = 104 bits (114), Expect = 5e-17 Identities = 302/459 (66%), Gaps = 11/459 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||| ||||| || ||||| |||||||| ||||| | ||||| || || |||||| Sbjct 220874 GTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCGATCTTCTGG 220933 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| |||| | ||||||| || || | || || ||| | |||||| | ||| Sbjct 220934 TTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATTTCTCGTGAC 220993 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || || | || || || || || | || || | || || |||| Sbjct 220994 GAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCTCAC--TTGCGTCACCGTCCCA 221051 Query 102098 TCAAGAGAAAGGAT-TCTTGAA-ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | | | ||| | || || || |||||||||| ||| || || || || || | Sbjct 221052 GCCA---AGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCC 221108 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 | ||| | | || || || | | ||||||||| |||| | ||| |||| |||| Sbjct 221109 TTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGCTCATGTGCCAATACA 221168 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGT 102273 |||| || || || ||| || | |||| |||| || ||||| | ||||| Sbjct 221169 TTGAGTTCGTCGCTGATCGCCTCCTCGTTGCTTTGGGCAACAAGAAAGTC--TATAACTC 221226 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||||| || ||||||||||| || ||||| | ||||||||||| || || Sbjct 221227 CACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGCAAGACCAACTTCTTCGA 221286 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGC 102372 |||| | |||| ||| || || ||| |||||||| Sbjct 221287 AAAGCGTGTCGGCGACTACCAGAAGGCCGGTGTCATGGC 221325 >seq79 Length=405269 Score = 98.7 bits (108), Expect = 2e-15 Identities = 182/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || ||| | || ||||||||||| || || | || ||| | || Sbjct 294275 TGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTG 294334 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || ||||||||||| || || || || | | | | | |||||||||||| | | || Sbjct 294335 TCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGA 294394 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 ||| || ||| ||| || || || || |||||||| || || | | ||| Sbjct 294395 GGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGAC 294454 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013 ||||| | ||||||||| ||||| | | || ||||||||| |||||||| ||| Sbjct 294455 ATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACA 294514 Query 95014 CGCATAATCATGTCCTGAGGGCGCTCA 95040 ||||| ||||||| || ||||| ||| Sbjct 294515 CGCATGATCATGTGTTGGGGGCGTTCA 294541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582630663140