Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq79 226 4e-54
seq73 111 2e-19
>seq79
Length=405269
Score = 226 bits (250), Expect = 4e-54
Identities = 586/893 (66%), Gaps = 0/893 (0%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| |||||||| || | |||| |||| | || ||||| || || | | | |
Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || || | | || || ||||||||||| ||||| || |||| ||||| | ||
Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | | |||||| ||||| ||||| ||| || | ||| | |
Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
||||| | |||||||| || | ||| || || | | |||| ||||| ||||| ||||||
Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||||| ||||| || |||||| || ||| |||| || ||||| ||
Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
||||| || |||| || || ||| || ||||||| ||| || ||
Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
|| || || || | || || || || || || || |||||||| || || || ||
Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
|| || || || |||||| | || || || || ||| || | | | || ||
Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
||||| || | |||||||||||| ||||| || |||||| ||| | || || || ||
Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469
Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788
|| || || |||| ||| | |||||||| || || |||||||| | ||||||
Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529
Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848
|| || | |||| ||| |||| ||| ||| | ||| || || |||||||| ||
Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589
Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908
|| || || || | ||| ||||| || || || | ||| | ||||| | | |||
Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649
Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 63968
|| | | ||| | || || || || ||||| | | || |||
Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709
Query 63969 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 64028
|| || |||| ||| | | | | || || ||||| | || |||| || |||| |
Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769
Query 64029 TTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
||||| ||||| |||| ||||| | ||| ||||| |||||||| || |||||
Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822
Score = 96.9 bits (106), Expect = 4e-15
Identities = 135/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 62939 CAATGCAACAGATGCCAGATTACACACGGCTACCTCAT-TAGCATCCGCATATTGTATTA 62997
||| |||| ||| ||||| ||||| || || || |||| | || | ||||| || |
Sbjct 293616 CAAAGCAATAGACGCCAGGTTACAAACTGCAACTTCATCTGGCGAGCA-ATATTCGATGA 293674
Query 62998 TCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGT 63057
|||||||||| || ||| | | || || || | || | |||||| ||||| ||||
Sbjct 293675 TCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATTGCTCTTCTTGT 293734
Query 63058 TACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 63117
| ||||| ||||| ||||| || ||||| ||||||| ||| | |||| ||| | ||| |
Sbjct 293735 TGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGCTTCAAGAATAG 293794
Query 63118 CTTTCCA 63124
| | |||
Sbjct 293795 CATACCA 293801
>seq73
Length=4627324
Score = 111 bits (122), Expect = 2e-19
Identities = 287/435 (66%), Gaps = 2/435 (0%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|| ||||| || || ||||| |||||||| || || || || || ||| || || ||
Sbjct 221310 TTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTG 221251
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| ||||| || ||||| || || | ||| || ||||| || |
Sbjct 221250 TCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAACGAGG 221191
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| | ||| |||||||| || || ||| ||| | | |||||||| | ||
Sbjct 221190 AGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGC 221131
Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530
|| || ||||| | | ||| || || || || || | || || | || || ||
Sbjct 221130 GCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATC 221071
Query 33531 AATCTA-ACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589
||| || | |||| || || | || || || || | | ||| |||||
Sbjct 221070 C-TCTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGACAGGCGAA 221012
Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649
||| ||| | |||||||| | | ||| | |||||||||||||| || || |||||
Sbjct 221011 ATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGGCAT 220952
Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709
||||| || || || | ||| || || |||||||| ||||| |||||||| |||||
Sbjct 220951 GAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCCTTC 220892
Query 33710 TACTGCAGCAAAGGC 33724
|| ||||| |||||
Sbjct 220891 GACGGCAGCGAAGGC 220877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816749746240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |