Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq79 105 6e-18 >seq79 Length=405269 Score = 105 bits (116), Expect = 6e-18 Identities = 291/443 (66%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || ||||| ||||| | |||||| || || | ||||| | | ||||| || | || Sbjct 294101 AATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTG 294160 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | ||||||||| | | ||||||| | ||||| || | | || | ||| || || || Sbjct 294161 TTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATT 294220 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 || || || ||| || | |||| || |||| ||| | | || || || Sbjct 294221 CCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATG 294280 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 | || || ||||| ||| ||||| || || || || || ||||| || | Sbjct 294281 TTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAA 294340 Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA---AACAACTAGACATTTGAGGC 38406 ||||| || |||||||| ||||| || || | |||| | || || ||| ||||| Sbjct 294341 ATACCCTCGATACTGTCCTCCTTCAT--GTCG-ATAAGGAAGCACGAAGCCATCTGAGGT 294397 Query 38407 AATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAA 38466 || || || || || || | |||||||| ||||| |||| |||||| |||| Sbjct 294398 TGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATG 294457 Query 38467 TAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTC 38526 ||||||||||| || || | |||| ||| | |||||||| || | || || | | Sbjct 294458 AGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGC 294517 Query 38527 ATTAGCATATGTTGTGGTCTTTC 38549 || | ||| ||||| || | ||| Sbjct 294518 ATGATCATGTGTTGGGGGCGTTC 294540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524167491520