Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq79 105 6e-18
>seq79
Length=405269
Score = 105 bits (116), Expect = 6e-18
Identities = 291/443 (66%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169
|| ||||| ||||| | |||||| || || | ||||| | | ||||| || | ||
Sbjct 294101 AATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTG 294160
Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229
| ||||||||| | | ||||||| | ||||| || | | || | ||| || || ||
Sbjct 294161 TTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATT 294220
Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289
|| || || ||| || | |||| || |||| ||| | | || || ||
Sbjct 294221 CCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATG 294280
Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349
| || || ||||| ||| ||||| || || || || || ||||| || |
Sbjct 294281 TTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAA 294340
Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA---AACAACTAGACATTTGAGGC 38406
||||| || |||||||| ||||| || || | |||| | || || ||| |||||
Sbjct 294341 ATACCCTCGATACTGTCCTCCTTCAT--GTCG-ATAAGGAAGCACGAAGCCATCTGAGGT 294397
Query 38407 AATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAA 38466
|| || || || || || | |||||||| ||||| |||| |||||| ||||
Sbjct 294398 TGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATG 294457
Query 38467 TAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTC 38526
||||||||||| || || | |||| ||| | |||||||| || | || || | |
Sbjct 294458 AGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGC 294517
Query 38527 ATTAGCATATGTTGTGGTCTTTC 38549
|| | ||| ||||| || | |||
Sbjct 294518 ATGATCATGTGTTGGGGGCGTTC 294540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524167491520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |