Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq79 226 4e-54 >seq79 Length=405269 Score = 226 bits (250), Expect = 4e-54 Identities = 586/893 (66%), Gaps = 0/893 (0%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || |||||||| || | ||||| | || || || ||| | || || | | | | Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || |||| | || || ||||||||||| ||||| || |||| ||||| | || Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | | | | ||||| ||||| ||||| ||| || | ||| | | Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| | |||||||| || | ||| || || | | ||||||| || ||||| |||||| Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | |||||||| ||||| || |||||| || ||| |||| || || ||||| Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 | ||||| || |||| || || ||| || ||||||| ||| || || Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || || | || || || || || || || ||||| || || || ||||| Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 || || || || |||||| | || || || || ||| || | | || || Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 ||||| || | |||||||||||| ||||| || |||||| ||||| || || || || Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469 Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 || || || |||| ||| | |||||||| || || |||||||| | |||||| Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || || | |||| | | ||| || ||| | ||| ||||| |||||||| || Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580 || || || || | ||| ||||| || || || | ||| | || || | || ||| Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649 Query 80581 TTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 80640 || | | ||| || ||| || || ||||| | | || ||| Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709 Query 80641 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 80700 || || |||| ||| | | | | || || ||||| | || |||| || |||| | Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769 Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||||| ||||| ||||| ||||| | ||| |||| |||||||| |||||||| Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267830337120