Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq79 226 4e-54
>seq79
Length=405269
Score = 226 bits (250), Expect = 4e-54
Identities = 586/893 (66%), Gaps = 0/893 (0%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| |||||||| || | ||||| | || || || ||| | || || | | | |
Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || |||| | || || ||||||||||| ||||| || |||| ||||| | ||
Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
||||| | | | | ||||| ||||| ||||| ||| || | ||| | |
Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
||||| | |||||||| || | ||| || || | | ||||||| || ||||| ||||||
Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | |||||||| ||||| || |||||| || ||| |||| || || |||||
Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220
| ||||| || |||| || || ||| || ||||||| ||| || ||
Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289
Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280
|| || || || | || || || || || || || ||||| || || || |||||
Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349
Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340
|| || || || |||||| | || || || || ||| || | | || ||
Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409
Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400
||||| || | |||||||||||| ||||| || |||||| ||||| || || || ||
Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469
Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460
|| || || |||| ||| | |||||||| || || |||||||| | ||||||
Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529
Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520
|| || | |||| | | ||| || ||| | ||| ||||| |||||||| ||
Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589
Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580
|| || || || | ||| ||||| || || || | ||| | || || | || |||
Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649
Query 80581 TTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 80640
|| | | ||| || ||| || || ||||| | | || |||
Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709
Query 80641 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 80700
|| || |||| ||| | | | | || || ||||| | || |||| || |||| |
Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769
Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
||||| ||||| ||||| ||||| | ||| |||| |||||||| ||||||||
Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267830337120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |