Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq79 241 2e-58 >seq79 Length=405269 Score = 241 bits (266), Expect = 2e-58 Identities = 589/893 (66%), Gaps = 0/893 (0%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || |||||||| || | ||| | || || || |||||| || || | | | | Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || |||| | | || ||||||||||| ||||| || |||| ||||| | || Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | | | | ||||| ||||| ||||| ||| || | ||| | | Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 ||||| | |||||||| || | ||| || || | | |||||||||| ||||| |||||| Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | |||||||| ||||| || |||||| || ||| |||| || || ||||| Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 | ||||| || |||| || || ||| || ||||||| | ||| || || Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363 || || || || | || || || || || || || ||||| || || || ||||| Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349 Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423 ||||| || ||| |||||| | || || || || ||| || | | || || Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483 ||||| || | |||||||||||| ||||| || |||||| ||||| || || || || Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469 Query 72484 TCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGC 72543 || || || |||| ||| | || ||||| || || |||||||| | ||| || Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529 Query 72544 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 72603 || || | |||| | | ||| || ||| | ||| || || |||||||| || Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589 Query 72604 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCC 72663 || || || || | ||| ||||| || || || | ||| | ||||| | || ||| Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649 Query 72664 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 72723 || | | ||| | || ||| || || ||||| | | || ||| Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709 Query 72724 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 72783 || || |||| ||| | | | | || || ||||| | || |||| || |||| | Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769 Query 72784 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| ||||| ||||| ||||| | ||| ||||| |||||||| |||||||| Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138293962080