Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq79 241 2e-58
>seq79
Length=405269
Score = 241 bits (266), Expect = 2e-58
Identities = 589/893 (66%), Gaps = 0/893 (0%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|| |||||||| || | ||| | || || || |||||| || || | | | |
Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
|| || |||| | | || ||||||||||| ||||| || |||| ||||| | ||
Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
||||| | | | | ||||| ||||| ||||| ||| || | ||| | |
Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
||||| | |||||||| || | ||| || || | | |||||||||| ||||| ||||||
Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
|| || | |||||||| ||||| || |||||| || ||| |||| || || |||||
Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303
| ||||| || |||| || || ||| || ||||||| | ||| || ||
Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289
Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363
|| || || || | || || || || || || || ||||| || || || |||||
Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349
Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423
||||| || ||| |||||| | || || || || ||| || | | || ||
Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409
Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483
||||| || | |||||||||||| ||||| || |||||| ||||| || || || ||
Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469
Query 72484 TCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGC 72543
|| || || |||| ||| | || ||||| || || |||||||| | ||| ||
Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529
Query 72544 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 72603
|| || | |||| | | ||| || ||| | ||| || || |||||||| ||
Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589
Query 72604 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCC 72663
|| || || || | ||| ||||| || || || | ||| | ||||| | || |||
Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649
Query 72664 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 72723
|| | | ||| | || ||| || || ||||| | | || |||
Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709
Query 72724 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 72783
|| || |||| ||| | | | | || || ||||| | || |||| || |||| |
Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769
Query 72784 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
||||| ||||| ||||| ||||| | ||| ||||| |||||||| ||||||||
Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138293962080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |