Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq75 95.1 1e-14
>seq75
Length=1151455
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 142987 TGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCG--AGTCTTCGAGTTGTTTA 143044
||| ||||||||||| || ||||| | || | ||| ||| ||| || || |||||
Sbjct 638968 TGTGGATTCTTTTTGGATATTGTAGT--CTGAGAGTGTTCGGCCGTCCTCAAGCTGTTTT 639025
Query 143045 CCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGT 143104
|| || |||| || |||||||| || || || || |||||||| || |||||| |
Sbjct 639026 CCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTGCTT 639085
Query 143105 TTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAAT 143164
|| | | || | || || | | ||| ||||||| ||| | ||| ||||||||||
Sbjct 639086 TTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAGG 639145
Query 143165 GTTTTTACGAATATTTGCAT 143184
|| || ||||| || |||||
Sbjct 639146 GTCTTAACGAAGATCTGCAT 639165
Score = 86.0 bits (94), Expect = 6e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||||||||| ||||| |||||| || || | |||||||| || || |||
Sbjct 639197 GTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCTTCGAGCTGCTTTCCA 639256
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||||| ||||||||| || || || ||||||||||| || ||||| |||
Sbjct 639257 GCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTTGCTCTTT 639316
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || |||| | ||| || || | || | |||||||| || | |||
Sbjct 639317 ACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTT 639376
Query 143168 TTTACGA 143174
|| ||||
Sbjct 639377 TTGACGA 639383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013715530560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |