Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq73 152 8e-32 >seq73 Length=4627324 Score = 152 bits (168), Expect = 8e-32 Identities = 346/516 (67%), Gaps = 21/516 (4%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || |||||| | |||| || ||||||||||| || | |||| | | || Sbjct 220805 ATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACCTTTGCA 220864 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| ||||| || ||||||||||| || || || | Sbjct 220865 CAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCG 220924 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||| | ||||| || || |||||||| || || ||| ||||||| |||| Sbjct 220925 ATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATT 220984 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 ||||| ||||||||| ||||| ||| || ||| ||| || || || | ||| |||| Sbjct 220985 TCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCTC-ACT---TGCG 221040 Query 125600 TCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGAT 125659 || | | ||||| | || ||| | || | || || || || | || Sbjct 221041 TC------ACCGTCCCAGCCAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTAT 221094 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719 || || ||||| || | || | || |||||| | |||| |||||| |||||| Sbjct 221095 CGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGCT 221154 Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT--GGCCGC 125777 |||||| | ||||| ||||| || || ||||| || || |||| || ||| | Sbjct 221155 CATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCT-----CGTTGCTTTGGGCAAC 221209 Query 125778 AAGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834 |||| | || ||| ||| || || ||||| |||||| || ||| || || | || Sbjct 221210 AAGAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGC 221269 Query 125835 AAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||||||| ||||| ||| ||| |||| ||| Sbjct 221270 AAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTAC 221305 Score = 118 bits (130), Expect = 2e-21 Identities = 190/268 (71%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| ||||||||||||| || |||| || || ||||| | ||||| | ||||| Sbjct 220406 ATTTGGCAAATGTACAAAAAAGCAGAGGCGTCGTTCTGGACCGCAGAAGAAATTGATCTC 220465 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || ||||| |||| ||| | | | |||| ||| ||||| | || || || Sbjct 220466 TCAAAAGACCTTCACGACTGGAACAACAGATTGAATGATGACGAGCGGTACTTCATCTCA 220525 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | ||||| ||||| |||| || ||||| ||||||||||| || ||| | || Sbjct 220526 CACGTCTTGGCATTCTTCGCCGCGTCGGATGGCATCGTCAACGAAAACCTGGTCGAGCGT 220585 Query 125199 TTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| | | |||| | |||| |||| ||| ||||| ||||| ||||| ||||||| Sbjct 220586 TTCAGCGGAGAAGTTCA-GGTTCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATCATGA 220643 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTC 125284 | || || | ||||| || | ||||| Sbjct 220644 TGGAAAATATTCACTCTGAGACCTACTC 220671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058199570080