Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq73 152 8e-32
>seq73
Length=4627324
Score = 152 bits (168), Expect = 8e-32
Identities = 346/516 (67%), Gaps = 21/516 (4%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || |||||| | |||| || ||||||||||| || | |||| | | ||
Sbjct 220805 ATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACCTTTGCA 220864
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || || || ||||| ||||| || ||||||||||| || || || |
Sbjct 220865 CAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCG 220924
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||| | ||||| || || |||||||| || || ||| ||||||| ||||
Sbjct 220925 ATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATT 220984
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599
||||| ||||||||| ||||| ||| || ||| ||| || || || | ||| ||||
Sbjct 220985 TCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCTC-ACT---TGCG 221040
Query 125600 TCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGAT 125659
|| | | ||||| | || ||| | || | || || || || | ||
Sbjct 221041 TC------ACCGTCCCAGCCAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTAT 221094
Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719
|| || ||||| || | || | || |||||| | |||| |||||| ||||||
Sbjct 221095 CGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGCT 221154
Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT--GGCCGC 125777
|||||| | ||||| ||||| || || ||||| || || |||| || ||| |
Sbjct 221155 CATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCT-----CGTTGCTTTGGGCAAC 221209
Query 125778 AAGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834
|||| | || ||| ||| || || ||||| |||||| || ||| || || | ||
Sbjct 221210 AAGAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGC 221269
Query 125835 AAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||||| ||||| ||| ||| |||| |||
Sbjct 221270 AAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTAC 221305
Score = 118 bits (130), Expect = 2e-21
Identities = 190/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| ||||||||||||| || |||| || || ||||| | ||||| | |||||
Sbjct 220406 ATTTGGCAAATGTACAAAAAAGCAGAGGCGTCGTTCTGGACCGCAGAAGAAATTGATCTC 220465
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| || ||||| |||| ||| | | | |||| ||| ||||| | || || ||
Sbjct 220466 TCAAAAGACCTTCACGACTGGAACAACAGATTGAATGATGACGAGCGGTACTTCATCTCA 220525
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | ||||| ||||| |||| || ||||| ||||||||||| || ||| | ||
Sbjct 220526 CACGTCTTGGCATTCTTCGCCGCGTCGGATGGCATCGTCAACGAAAACCTGGTCGAGCGT 220585
Query 125199 TTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| | | |||| | |||| |||| ||| ||||| ||||| ||||| |||||||
Sbjct 220586 TTCAGCGGAGAAGTTCA-GGTTCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATCATGA 220643
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTC 125284
| || || | ||||| || | |||||
Sbjct 220644 TGGAAAATATTCACTCTGAGACCTACTC 220671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058199570080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |