Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq75 107 1e-18
>seq75
Length=1151455
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| |||||||| |||||||| ||||| |||||| | | | | ||||| | ||
Sbjct 639190 ATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCTTCGAGCTG 639249
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
|| |||||| | ||||||||||| ||||| || || |||||||| || |||||
Sbjct 639250 CTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTT 639309
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||||||||| | || |||||||| | ||| || || |||||||| || || || ||
Sbjct 639310 GCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTTGCCAGT 639369
Query 15340 CAGAGTTTTTAC 15351
|| ||||| ||
Sbjct 639370 GAGGGTTTTGAC 639381
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195
|||||| | |||||| || || ||||| || ||| || || || ||||| |||||
Sbjct 638710 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGA 638769
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
|| | | | ||||||| || || ||||| | || | ||| || || || |||
Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829
Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||| ||||| || || |||||||| ||||| | || || || ||| | || ||
Sbjct 638830 AATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGAC 638889
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || || ||||| || ||||||||||| || || || ||||||
Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCATA 638938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178723281628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |