Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq75 107 1e-18 >seq75 Length=1151455 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| |||||||| ||||| |||||| | | | | ||||| | || Sbjct 639190 ATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCTTCGAGCTG 639249 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || |||||| | ||||||||||| ||||| || || |||||||| || ||||| Sbjct 639250 CTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTT 639309 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||||||||| | || |||||||| | ||| || || |||||||| || || || || Sbjct 639310 GCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTTGCCAGT 639369 Query 15340 CAGAGTTTTTAC 15351 || ||||| || Sbjct 639370 GAGGGTTTTGAC 639381 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 |||||| | |||||| || || ||||| || ||| || || || ||||| ||||| Sbjct 638710 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGA 638769 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | ||||||| || || ||||| | || | ||| || || || ||| Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||| ||||| || || |||||||| ||||| | || || || ||| | || || Sbjct 638830 AATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGAC 638889 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || || ||||| || ||||||||||| || || || |||||| Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCATA 638938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178723281628